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Interactive Phylogenetics Module
BLAST
Workbench
Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
Ec-01_006080
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
Ec-01_006080
Ectocarpus siliculosus
0.0e+00
1230.3
645
100.0
Pp3c14_23660
Physcomitrella patens
1.6e-65
252.3
492
37.0
gsu71910
Galdieria sulphuraria
2.1e-65
251.9
454
35.9
CM13G02840
Cyanidioschyzon merolae
1.3e-57
226.1
442
36.4
emh540590
Emiliania huxleyi
2.1e-57
225.3
359
40.4
ccr06940
Chondrus crispus
1.1e-53
213.0
451
35.3
Cre07.g338602
Chlamydomonas reinhardtii
4.6e-52
207.6
541
30.3
AT5G44740
Arabidopsis thaliana
8.7e-51
203.4
376
37.5
emh725060
Emiliania huxleyi
1.3e-49
199.5
433
36.5
ENSG00000170734
Homo sapiens
1.6e-49
199.1
382
35.3
FBgn0037141
Drosophila melanogaster
3.1e-48
194.9
390
32.8
SPBC16A3.11
Schizosaccharomyces pombe
4.0e-48
194.5
350
32.9
Pp3c8_17250
Physcomitrella patens
9.0e-48
193.4
378
36.0
ptri167230
Phaeodactylum tricornutum
2.2e-38
162.2
491
31.2
pte497140
Paramecium tetraurelia
2.5e-37
158.7
341
32.3
CC00G27440
Cyclotella cryptica
7.9e-36
153.7
458
27.7
pte645160
Paramecium tetraurelia
2.3e-35
152.1
339
31.6
ENSG00000101751
Homo sapiens
7.4e-34
147.1
340
31.8
Sro492_g153880
Seminavis robusta
3.1e-32
141.7
425
30.4
WBGene00018721
Caenorhabditis elegans
4.1e-32
141.4
383
30.0
Cre03.g148050
Chlamydomonas reinhardtii
3.4e-31
138.3
463
27.6
tps207050
Thalassiosira pseudonana
3.8e-30
134.8
526
26.6
sya00G252360
Synedra acus
1.1e-29
133.3
653
25.6
emh81660
Emiliania huxleyi
8.7e-27
123.6
384
30.5
PSNMU-V1.4_AUG-EV-PASAV3_0038520
Pseudo-nitzschia multistriata
8.7e-27
123.6
574
26.0
sya00G217370
Synedra acus
8.7e-27
123.6
537
27.4
fso166840
Fistulifera solaris
1.1e-26
123.2
401
31.9
Sro88_g046710
Seminavis robusta
1.5e-26
122.9
778
23.8
emh135140
Emiliania huxleyi
4.3e-26
121.3
384
30.2
Naga_100010g99
Nannochloropsis gaditana
4.3e-26
121.3
576
26.0
Cre12.g524150
Chlamydomonas reinhardtii
1.3e-25
119.8
274
34.7
fso02980
Fistulifera solaris
1.6e-25
119.4
418
30.9
emh530300
Emiliania huxleyi
8.2e-25
117.1
514
27.2
emh67860
Emiliania huxleyi
8.2e-25
117.1
514
27.2
YDR419W
Saccharomyces cerevisiae strain S288C
1.8e-24
115.9
439
27.3
gene10065
Fragilariopsis cylindrus
3.8e-22
108.2
473
24.9
ps00G114530
Pseudo-nitzschia multiseries
6.5e-22
107.5
513
26.1
FBgn0037554
Drosophila melanogaster
2.5e-21
105.5
345
28.4
gsu33630
Galdieria sulphuraria
2.5e-21
105.5
354
25.7
AT5G44750
Arabidopsis thaliana
9.4e-21
103.6
340
26.5
fso64850
Fistulifera solaris
3.6e-20
101.7
414
26.1
gsu07230
Galdieria sulphuraria
2.0e-18
95.9
358
27.1
fso43860
Fistulifera solaris
2.6e-18
95.5
266
30.8
ptri207540
Phaeodactylum tricornutum
9.7e-18
93.6
276
26.4
ps00G14990
Pseudo-nitzschia multiseries
1.7e-17
92.8
540
24.3
Pp3c22_4740
Physcomitrella patens
2.2e-17
92.4
379
24.8
ccr169420
Chondrus crispus
4.8e-17
91.3
400
25.5
Sro556_g165920
Seminavis robusta
8.2e-17
90.5
283
29.0
ccr44120
Chondrus crispus
1.1e-16
90.1
382
25.9
AA0010G01150
Aureococcus anophagefferens
2.4e-16
89.0
259
29.0
gsu142230
Galdieria sulphuraria
4.1e-16
88.2
311
25.7
fso30800
Fistulifera solaris
1.2e-15
86.7
356
23.9
Naga_100015g71
Nannochloropsis gaditana
1.2e-15
86.7
343
26.5
Cre12.g550800
Chlamydomonas reinhardtii
1.5e-15
86.3
348
26.1
emh225200
Emiliania huxleyi
1.5e-15
86.3
493
26.0
WBGene00017696
Caenorhabditis elegans
2.6e-15
85.5
356
25.8
Naga_100321g4
Nannochloropsis gaditana
1.7e-14
82.8
393
26.7
AA0002G04000
Aureococcus anophagefferens
3.8e-14
81.6
211
30.3
tho502460
Thalassiosira oceanica
3.8e-14
81.6
230
28.7
sya00G252680
Synedra acus
5.0e-14
81.3
271
29.5
CM01G00620
Cyanidioschyzon merolae
8.5e-14
80.5
257
31.5
fso119250
Fistulifera solaris
1.9e-13
79.3
391
22.3
pte538790
Paramecium tetraurelia
9.4e-13
77.0
374
23.0
AT1G49980
Arabidopsis thaliana
1.2e-12
76.6
654
22.8
Cre17.g732900
Chlamydomonas reinhardtii
1.2e-12
76.6
337
26.1
ENSG00000135945
Homo sapiens
1.6e-12
76.3
368
23.1
Cre02.g079850
Chlamydomonas reinhardtii
2.7e-12
75.5
251
27.9
SPCC553.07c
Schizosaccharomyces pombe
6.1e-12
74.3
251
26.3
pte531460
Paramecium tetraurelia
1.8e-11
72.8
289
26.6
Ec-17_000370
Ectocarpus siliculosus
3.0e-11
72.0
161
31.1
WBGene00014066
Caenorhabditis elegans
5.2e-11
71.2
416
23.3
ENSG00000122008
Homo sapiens
1.5e-10
69.7
356
23.6
ps00G09480
Pseudo-nitzschia multiseries
2.0e-10
69.3
431
22.0
PSNMU-V1.4_AUG-EV-PASAV3_0106360
Pseudo-nitzschia multistriata
3.3e-10
68.6
330
23.9
ptri32900
Phaeodactylum tricornutum
4.4e-10
68.2
321
23.1
FBgn0035150
Drosophila melanogaster
9.7e-10
67.0
366
22.7
emh117440
Emiliania huxleyi
1.3e-09
66.6
80
45.0
SPBC1347.01c
Schizosaccharomyces pombe
2.2e-09
65.9
316
22.5
ps00G173860
Pseudo-nitzschia multiseries
2.8e-09
65.5
285
25.3
Sro142_g066040
Seminavis robusta
2.8e-09
65.5
391
22.8
ptri209620
Phaeodactylum tricornutum
2.4e-08
62.4
315
28.9
Ec-04_000720
Ectocarpus siliculosus
5.3e-08
61.2
380
25.3
CC00G31330
Cyclotella cryptica
7.0e-08
60.8
204
29.4
tho187600
Thalassiosira oceanica
9.1e-08
60.5
213
28.2
emh482430
Emiliania huxleyi
1.2e-07
60.1
350
23.4
emh197460
Emiliania huxleyi
1.2e-07
60.1
350
23.4
sya00G66530
Synedra acus
1.2e-07
60.1
353
22.9
sya00G09980
Synedra acus
1.6e-07
59.7
351
23.1
emh578990
Emiliania huxleyi
2.6e-07
58.9
279
25.4
Ec-14_004450
Ectocarpus siliculosus
1.7e-06
56.2
382
22.0
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (4 genes)
Thalassiosira pseudonana (1 genes)
Thalassiosira oceanica (2 genes)
Pseudo-nitzschia multiseries (4 genes)
Fistulifera solaris (6 genes)
Fragilariopsis cylindrus (1 genes)
Cyclotella cryptica (2 genes)
Aureococcus anophagefferens (2 genes)
Ectocarpus siliculosus (4 genes)
Nannochloropsis gaditana (3 genes)
Homo sapiens (4 genes)
Drosophila melanogaster (3 genes)
Caenorhabditis elegans (3 genes)
Saccharomyces cerevisiae strain S288C (1 genes)
Schizosaccharomyces pombe (3 genes)
Arabidopsis thaliana (3 genes)
Cyanidioschyzon merolae (2 genes)
Chondrus crispus (3 genes)
Galdieria sulphuraria (4 genes)
Emiliania huxleyi (11 genes)
Paramecium tetraurelia (4 genes)
Seminavis robusta (4 genes)
Synedra acus (5 genes)
Physcomitrella patens (3 genes)
Chlamydomonas reinhardtii (6 genes)
Pseudo-nitzschia multistriata (2 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
Positions only
Genes only
Positions and Genes
No editing