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Interactive Phylogenetics Module
BLAST
Workbench
Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
Cre17.g718300
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
Cre17.g718300
Chlamydomonas reinhardtii
9.3e-166
584.3
333
100.0
AT5G22920
Arabidopsis thaliana
2.9e-66
253.8
248
56.9
AT3G62970
Arabidopsis thaliana
1.3e-63
245.0
273
53.8
Pp3c11_6970
Physcomitrella patens
5.1e-63
243.0
250
55.6
Pp3c10_4820
Physcomitrella patens
3.3e-62
240.4
253
54.2
Pp3c2_31820
Physcomitrella patens
9.6e-62
238.8
251
55.0
Pp3c1_6070
Physcomitrella patens
1.6e-61
238.0
254
56.3
AT5G18650
Arabidopsis thaliana
6.2e-61
236.1
261
52.9
Pp3c14_5600
Physcomitrella patens
1.8e-60
234.6
248
54.0
AT5G25560
Arabidopsis thaliana
1.3e-53
211.8
247
51.4
FBgn0031816
Drosophila melanogaster
1.3e-45
185.3
249
35.3
Naga_100090g9
Nannochloropsis gaditana
5.9e-43
176.4
253
39.9
Cre05.g248550
Chlamydomonas reinhardtii
8.5e-42
172.6
249
43.0
ccr65580
Chondrus crispus
1.9e-41
171.4
251
36.7
ps00G33510
Pseudo-nitzschia multiseries
4.2e-41
170.2
264
33.7
AT1G18910
Arabidopsis thaliana
1.2e-40
168.7
249
39.0
CM13G01410
Cyanidioschyzon merolae
1.6e-40
168.3
249
40.2
CC00G86210
Cyclotella cryptica
2.7e-40
167.5
252
34.9
tho217020
Thalassiosira oceanica
2.7e-40
167.5
248
41.9
ccr161060
Chondrus crispus
3.6e-40
167.2
276
34.4
ENSG00000163743
Homo sapiens
4.7e-40
166.8
236
35.6
Pp3c25_14501
Physcomitrella patens
4.7e-40
166.8
250
45.2
Pp3c25_14500
Physcomitrella patens
4.7e-40
166.8
250
45.2
gsu76240
Galdieria sulphuraria
1.4e-39
165.2
263
36.9
AT1G74770
Arabidopsis thaliana
1.8e-39
164.9
249
35.3
gene16313
Fragilariopsis cylindrus
1.1e-38
162.2
245
33.9
ps00G05920
Pseudo-nitzschia multiseries
2.0e-38
161.4
269
40.9
Sro968_g226070
Seminavis robusta
4.4e-38
160.2
245
35.1
sya00G161050
Synedra acus
4.4e-38
160.2
245
34.7
Sro99_g050950
Seminavis robusta
9.7e-38
159.1
245
35.1
ptri130290
Phaeodactylum tricornutum
1.3e-37
158.7
245
34.7
fso77080
Fistulifera solaris
3.7e-37
157.1
245
33.5
fso155640
Fistulifera solaris
3.7e-37
157.1
253
33.6
SPAC2F3.16
Schizosaccharomyces pombe
4.8e-37
156.8
248
36.3
fso77050
Fistulifera solaris
8.2e-37
156.0
247
37.7
AT3G18290
Arabidopsis thaliana
1.1e-36
155.6
249
34.1
fso191720
Fistulifera solaris
1.1e-36
155.6
247
37.7
Pp3c6_1960
Physcomitrella patens
1.8e-36
154.8
250
43.6
sya00G162130
Synedra acus
2.4e-36
154.5
255
34.1
tps130000
Thalassiosira pseudonana
3.1e-36
154.1
250
34.8
fso160310
Fistulifera solaris
4.1e-36
153.7
245
35.5
Ec-26_004520
Ectocarpus siliculosus
1.7e-34
148.3
267
36.7
pte243060
Paramecium tetraurelia
6.5e-34
146.4
252
41.3
ccr36960
Chondrus crispus
8.5e-34
146.0
253
37.5
ptri72160
Phaeodactylum tricornutum
2.5e-33
144.4
270
34.8
tps146910
Thalassiosira pseudonana
7.2e-33
142.9
217
34.1
sya00G196410
Synedra acus
1.6e-32
141.7
272
34.6
fso199510
Fistulifera solaris
1.0e-31
139.0
280
34.6
Sro70_g039030
Seminavis robusta
1.0e-31
139.0
272
36.4
ps00G65070
Pseudo-nitzschia multiseries
1.8e-31
138.3
279
35.1
fso73640
Fistulifera solaris
2.3e-31
137.9
278
35.3
tps142420
Thalassiosira pseudonana
8.8e-31
136.0
246
36.2
ptri69840
Phaeodactylum tricornutum
1.1e-30
135.6
286
32.5
tho87860
Thalassiosira oceanica
1.1e-30
135.6
226
39.8
tps193950
Thalassiosira pseudonana
2.0e-30
134.8
246
36.2
gene18213
Fragilariopsis cylindrus
1.7e-29
131.7
275
34.2
pte443830
Paramecium tetraurelia
6.3e-29
129.8
247
40.5
fso43770
Fistulifera solaris
8.2e-29
129.4
274
34.7
fso64760
Fistulifera solaris
8.2e-29
129.4
274
34.7
gene11141
Fragilariopsis cylindrus
1.7e-26
121.7
197
44.7
pte760660
Paramecium tetraurelia
2.5e-25
117.9
249
39.4
Sro695_g188680
Seminavis robusta
2.7e-24
114.4
250
35.6
fso150310
Fistulifera solaris
4.7e-24
113.6
191
31.9
CC00G122160
Cyclotella cryptica
6.1e-24
113.2
214
36.9
CC00G149660
Cyclotella cryptica
2.0e-22
108.2
213
34.7
sya00G00440
Synedra acus
1.8e-15
85.1
124
38.7
Sro9_g007140
Seminavis robusta
6.8e-15
83.2
157
28.7
CC00G69060
Cyclotella cryptica
1.5e-14
82.0
150
32.7
ccr143140
Chondrus crispus
8.3e-13
76.3
173
35.3
ccr83600
Chondrus crispus
2.8e-08
61.2
86
34.9
Sro345_g122370
Seminavis robusta
3.4e-06
54.3
92
35.9
ccr85280
Chondrus crispus
7.5e-06
53.1
80
37.5
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (3 genes)
Thalassiosira pseudonana (4 genes)
Thalassiosira oceanica (2 genes)
Pseudo-nitzschia multiseries (3 genes)
Fistulifera solaris (10 genes)
Fragilariopsis cylindrus (3 genes)
Cyclotella cryptica (4 genes)
Aureococcus anophagefferens (0 genes)
Ectocarpus siliculosus (1 genes)
Nannochloropsis gaditana (1 genes)
Homo sapiens (1 genes)
Drosophila melanogaster (1 genes)
Caenorhabditis elegans (0 genes)
Saccharomyces cerevisiae strain S288C (0 genes)
Schizosaccharomyces pombe (1 genes)
Arabidopsis thaliana (7 genes)
Cyanidioschyzon merolae (1 genes)
Chondrus crispus (6 genes)
Galdieria sulphuraria (1 genes)
Emiliania huxleyi (0 genes)
Paramecium tetraurelia (3 genes)
Seminavis robusta (6 genes)
Synedra acus (4 genes)
Physcomitrella patens (8 genes)
Chlamydomonas reinhardtii (2 genes)
Pseudo-nitzschia multistriata (0 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
Positions only
Genes only
Positions and Genes
No editing