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Interactive Phylogenetics Module
BLAST
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Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
Cre09.g397327
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
Cre09.g397327
Chlamydomonas reinhardtii
0.0e+00
4776.1
6857
100.0
Pp3c9_15240
Physcomitrella patens
3.1e-37
161.8
504
29.0
ENSG00000253729
Homo sapiens
2.2e-35
155.6
498
26.3
Naga_100223g3
Nannochloropsis gaditana
9.3e-26
123.6
309
31.1
AA0002G00790
Aureococcus anophagefferens
7.4e-23
114.0
299
31.8
gsu133660
Galdieria sulphuraria
4.8e-22
111.3
317
28.4
gene6550
Fragilariopsis cylindrus
4.0e-21
108.2
321
28.7
gsu60470
Galdieria sulphuraria
1.5e-20
106.3
308
27.9
Sro182_g079310
Seminavis robusta
2.0e-20
105.9
318
28.0
pte423930
Paramecium tetraurelia
2.6e-20
105.5
320
27.2
Cre09.g400553
Chlamydomonas reinhardtii
5.8e-20
104.4
308
26.9
pte640920
Paramecium tetraurelia
2.9e-19
102.1
304
26.3
Ec-04_000240
Ectocarpus siliculosus
6.5e-19
100.9
334
27.8
Naga_100063g26
Nannochloropsis gaditana
6.5e-19
100.9
311
28.0
Pp3c6_4910
Physcomitrella patens
6.5e-19
100.9
308
28.2
ptri96530
Phaeodactylum tricornutum
6.5e-19
100.9
311
27.3
Pp3c10_4250
Physcomitrella patens
8.4e-19
100.5
329
25.8
ps00G56500
Pseudo-nitzschia multiseries
8.4e-19
100.5
311
28.3
emh448390
Emiliania huxleyi
1.1e-18
100.1
317
30.0
AT1G50030
Arabidopsis thaliana
1.4e-18
99.8
312
26.9
ccr53360
Chondrus crispus
1.4e-18
99.8
311
27.7
emh595980
Emiliania huxleyi
1.4e-18
99.8
302
28.8
ccr71660
Chondrus crispus
1.9e-18
99.4
304
27.0
Pp3c6_3460
Physcomitrella patens
1.9e-18
99.4
304
26.0
Cre10.g467200
Chlamydomonas reinhardtii
2.5e-18
99.0
313
26.5
FBgn0021796
Drosophila melanogaster
2.5e-18
99.0
299
27.4
ENSG00000198793
Homo sapiens
3.2e-18
98.6
317
26.8
ENSG00000157106
Homo sapiens
3.2e-18
98.6
324
26.9
AT5G40820
Arabidopsis thaliana
5.5e-18
97.8
304
25.7
Ec-23_002960
Ectocarpus siliculosus
9.3e-18
97.1
309
27.5
AA0020G00970
Aureococcus anophagefferens
1.2e-17
96.7
276
30.4
fso64990
Fistulifera solaris
1.2e-17
96.7
299
27.4
fso65350
Fistulifera solaris
1.2e-17
96.7
299
27.4
ENSG00000175054
Homo sapiens
2.7e-17
95.5
304
25.7
tps14600
Thalassiosira pseudonana
2.7e-17
95.5
321
27.1
CC00G44090
Cyclotella cryptica
3.5e-17
95.1
331
24.8
gsu118320
Galdieria sulphuraria
4.6e-17
94.7
304
27.3
SPBC216.07c
Schizosaccharomyces pombe
6.0e-17
94.4
307
27.0
sya00G73490
Synedra acus
1.3e-16
93.2
307
25.4
Cre13.g572050
Chlamydomonas reinhardtii
1.8e-16
92.8
324
27.2
Naga_100012g19
Nannochloropsis gaditana
1.8e-16
92.8
308
28.2
WBGene00002583
Caenorhabditis elegans
2.3e-16
92.4
311
27.0
ENSG00000149311
Homo sapiens
2.3e-16
92.4
312
25.0
AA0003G03360
Aureococcus anophagefferens
3.0e-16
92.0
314
27.7
YJR066W
Saccharomyces cerevisiae strain S288C
3.0e-16
92.0
297
25.9
YKL203C
Saccharomyces cerevisiae strain S288C
3.0e-16
92.0
307
26.7
Cre13.g564350
Chlamydomonas reinhardtii
3.9e-16
91.7
211
34.6
pte01440
Paramecium tetraurelia
3.9e-16
91.7
320
25.9
SPBC30D10.10c
Schizosaccharomyces pombe
5.1e-16
91.3
320
25.6
CM14G00750
Cyanidioschyzon merolae
6.7e-16
90.9
307
27.0
AT3G48190
Arabidopsis thaliana
1.1e-15
90.1
306
26.1
gsu37190
Galdieria sulphuraria
1.1e-15
90.1
322
24.8
CM18G00180
Cyanidioschyzon merolae
1.5e-15
89.7
303
26.7
FBgn0004367
Drosophila melanogaster
2.5e-15
89.0
265
26.4
ps00G184880
Pseudo-nitzschia multiseries
5.7e-15
87.8
329
25.5
emh191960
Emiliania huxleyi
9.6e-15
87.0
294
28.6
Ec-04_004450
Ectocarpus siliculosus
9.6e-15
87.0
319
27.3
SPBC216.05
Schizosaccharomyces pombe
9.6e-15
87.0
304
24.0
FBgn0263968
Drosophila melanogaster
1.3e-14
86.7
319
25.1
fso39040
Fistulifera solaris
1.6e-14
86.3
329
28.6
fso00810
Fistulifera solaris
2.1e-14
85.9
332
28.0
Pp3c2_23700
Physcomitrella patens
2.1e-14
85.9
298
27.9
YBR136W
Saccharomyces cerevisiae strain S288C
3.7e-14
85.1
276
27.5
WBGene00004879
Caenorhabditis elegans
6.2e-14
84.3
327
26.6
ccr88100
Chondrus crispus
8.2e-14
84.0
304
24.0
ptri183550
Phaeodactylum tricornutum
8.2e-14
84.0
332
27.4
FBgn0045035
Drosophila melanogaster
1.1e-13
83.6
322
23.9
emh639960
Emiliania huxleyi
1.1e-13
83.6
294
26.9
emh94000
Emiliania huxleyi
1.1e-13
83.6
294
26.9
Naga_100037g16
Nannochloropsis gaditana
1.1e-13
83.6
271
28.0
AA0024G00400
Aureococcus anophagefferens
1.8e-13
82.8
320
24.1
AA0017G00800
Aureococcus anophagefferens
4.1e-13
81.6
260
29.6
PSNMU-V1.4_AUG-EV-PASAV3_0010960
Pseudo-nitzschia multistriata
4.1e-13
81.6
316
27.8
CC00G11370
Cyclotella cryptica
1.2e-12
80.1
247
26.3
ptri105360
Phaeodactylum tricornutum
1.2e-12
80.1
278
27.0
Sro98_g050510
Seminavis robusta
1.2e-12
80.1
333
25.2
AA0004G01310
Aureococcus anophagefferens
3.4e-12
78.6
309
26.9
gene8536
Fragilariopsis cylindrus
4.5e-12
78.2
308
24.4
CC00G24240
Cyclotella cryptica
7.6e-12
77.4
347
25.6
YBL088C
Saccharomyces cerevisiae strain S288C
1.7e-11
76.3
238
28.2
ps00G76540
Pseudo-nitzschia multiseries
2.2e-11
75.9
310
27.1
emh371550
Emiliania huxleyi
6.5e-11
74.3
222
27.5
gene12720
Fragilariopsis cylindrus
8.4e-11
73.9
102
35.3
Ec-04_002480
Ectocarpus siliculosus
1.1e-10
73.6
306
24.2
gene20842
Fragilariopsis cylindrus
1.1e-10
73.6
102
35.3
SPCC23B6.03c
Schizosaccharomyces pombe
1.9e-10
72.8
254
25.6
tps60950
Thalassiosira pseudonana
2.5e-10
72.4
326
22.7
Sro154_g070060
Seminavis robusta
3.2e-10
72.0
253
25.3
sya00G253840
Synedra acus
4.2e-10
71.6
313
24.0
Naga_100690g2
Nannochloropsis gaditana
5.5e-10
71.2
258
25.6
PSNMU-V1.4_AUG-EV-PASAV3_0013470
Pseudo-nitzschia multistriata
7.2e-10
70.9
112
33.9
emh416420
Emiliania huxleyi
2.1e-09
69.3
117
35.9
tho57660
Thalassiosira oceanica
3.5e-09
68.6
270
24.1
emh365240
Emiliania huxleyi
1.8e-08
66.2
59
50.8
emh152940
Emiliania huxleyi
1.8e-08
66.2
59
50.8
Ec-03_001100
Ectocarpus siliculosus
2.3e-08
65.9
112
38.4
Naga_100183g1
Nannochloropsis gaditana
3.3e-07
62.0
103
35.9
tho88760
Thalassiosira oceanica
3.3e-07
62.0
299
25.4
fso12980
Fistulifera solaris
7.4e-07
60.8
113
35.4
tps224750
Thalassiosira pseudonana
9.7e-07
60.5
112
33.0
Ec-04_004490
Ectocarpus siliculosus
1.3e-06
60.1
101
33.7
fso75640
Fistulifera solaris
1.3e-06
60.1
113
35.4
sya00G204940
Synedra acus
4.8e-06
58.2
253
23.7
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (3 genes)
Thalassiosira pseudonana (3 genes)
Thalassiosira oceanica (2 genes)
Pseudo-nitzschia multiseries (3 genes)
Fistulifera solaris (6 genes)
Fragilariopsis cylindrus (4 genes)
Cyclotella cryptica (3 genes)
Aureococcus anophagefferens (6 genes)
Ectocarpus siliculosus (6 genes)
Nannochloropsis gaditana (6 genes)
Homo sapiens (5 genes)
Drosophila melanogaster (4 genes)
Caenorhabditis elegans (2 genes)
Saccharomyces cerevisiae strain S288C (4 genes)
Schizosaccharomyces pombe (4 genes)
Arabidopsis thaliana (3 genes)
Cyanidioschyzon merolae (2 genes)
Chondrus crispus (3 genes)
Galdieria sulphuraria (4 genes)
Emiliania huxleyi (9 genes)
Paramecium tetraurelia (3 genes)
Seminavis robusta (3 genes)
Synedra acus (3 genes)
Physcomitrella patens (5 genes)
Chlamydomonas reinhardtii (5 genes)
Pseudo-nitzschia multistriata (2 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
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Genes only
Positions and Genes
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