Toggle navigation
Data
Overview
Download
Analyze
Gene families
Expansion_plot
Gene family finder
Synteny plot
Colinearity
Ks-graphs
Skyline plot
WGDotplot
Colinear region finder
Localization
Functional clusters
WGMapping
Other
Interactive Phylogenetics Module
BLAST
Workbench
Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
Cre07.g333850
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
Cre07.g333850
Chlamydomonas reinhardtii
7.6e-239
828.2
683
100.0
Pp3c5_3280
Physcomitrella patens
4.9e-44
181.0
186
55.4
AT1G55915
Arabidopsis thaliana
1.6e-34
149.4
181
48.1
ccr158060
Chondrus crispus
6.0e-26
120.9
193
38.3
gsu125420
Galdieria sulphuraria
4.0e-22
108.2
175
40.6
YHR134W
Saccharomyces cerevisiae strain S288C
1.0e-17
93.6
116
41.4
CM19G00480
Cyanidioschyzon merolae
1.2e-13
80.1
223
30.5
tps189580
Thalassiosira pseudonana
8.4e-12
73.9
141
32.6
SPCC1442.07c
Schizosaccharomyces pombe
2.7e-10
68.9
121
36.4
Sro477_g150850
Seminavis robusta
3.5e-10
68.6
129
31.0
fso54550
Fistulifera solaris
2.3e-09
65.9
121
28.9
fso06130
Fistulifera solaris
8.7e-09
63.9
120
28.3
sya00G96120
Synedra acus
5.6e-08
61.2
132
29.5
sya00G135410
Synedra acus
5.6e-08
61.2
125
30.4
CC00G116000
Cyclotella cryptica
9.6e-08
60.5
128
28.1
emh260210
Emiliania huxleyi
2.8e-07
58.9
130
35.4
emh58290
Emiliania huxleyi
2.8e-07
58.9
130
35.4
Ec-00_000920
Ectocarpus siliculosus
6.9e-06
54.3
51
49.0
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (0 genes)
Thalassiosira pseudonana (1 genes)
Thalassiosira oceanica (0 genes)
Pseudo-nitzschia multiseries (0 genes)
Fistulifera solaris (2 genes)
Fragilariopsis cylindrus (0 genes)
Cyclotella cryptica (1 genes)
Aureococcus anophagefferens (0 genes)
Ectocarpus siliculosus (1 genes)
Nannochloropsis gaditana (0 genes)
Homo sapiens (0 genes)
Drosophila melanogaster (0 genes)
Caenorhabditis elegans (0 genes)
Saccharomyces cerevisiae strain S288C (1 genes)
Schizosaccharomyces pombe (1 genes)
Arabidopsis thaliana (1 genes)
Cyanidioschyzon merolae (1 genes)
Chondrus crispus (1 genes)
Galdieria sulphuraria (1 genes)
Emiliania huxleyi (2 genes)
Paramecium tetraurelia (0 genes)
Seminavis robusta (1 genes)
Synedra acus (2 genes)
Physcomitrella patens (1 genes)
Chlamydomonas reinhardtii (1 genes)
Pseudo-nitzschia multistriata (0 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
Positions only
Genes only
Positions and Genes
No editing