Toggle navigation
Data
Overview
Download
Analyze
Gene families
Expansion_plot
Gene family finder
Synteny plot
Colinearity
Ks-graphs
Skyline plot
WGDotplot
Colinear region finder
Localization
Functional clusters
WGMapping
Other
Interactive Phylogenetics Module
BLAST
Workbench
Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
Cre06.g291700
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
Cre06.g291700
Chlamydomonas reinhardtii
9.6e-210
731.1
517
100.0
ENSG00000130363
Homo sapiens
1.7e-57
225.3
305
46.6
AA0045G00100
Aureococcus anophagefferens
3.0e-54
214.5
304
51.6
Ec-15_001990
Ectocarpus siliculosus
1.8e-46
188.7
351
42.5
Pp3c7_6220
Physcomitrella patens
4.8e-44
180.6
330
48.2
pte608260
Paramecium tetraurelia
1.4e-38
162.5
301
37.5
pte398810
Paramecium tetraurelia
1.5e-37
159.1
301
36.5
pte771510
Paramecium tetraurelia
2.4e-35
151.8
273
35.9
emh54760
Emiliania huxleyi
7.5e-29
130.2
136
52.9
FBgn0052392
Drosophila melanogaster
3.8e-25
117.9
163
41.7
pte264470
Paramecium tetraurelia
3.4e-21
104.8
186
36.0
pte279880
Paramecium tetraurelia
8.3e-20
100.1
181
34.3
pte332770
Paramecium tetraurelia
8.3e-20
100.1
183
35.0
pte265440
Paramecium tetraurelia
7.0e-19
97.1
244
30.3
Ec-08_000250
Ectocarpus siliculosus
1.0e-17
93.2
167
44.3
pte07010
Paramecium tetraurelia
1.0e-17
93.2
258
29.8
AA0006G04130
Aureococcus anophagefferens
3.0e-17
91.7
321
28.7
pte31990
Paramecium tetraurelia
2.8e-15
85.1
291
27.1
pte441640
Paramecium tetraurelia
8.0e-15
83.6
291
27.1
pte314790
Paramecium tetraurelia
8.9e-14
80.1
276
27.9
Pp3c13_8010
Physcomitrella patens
1.2e-10
69.7
262
28.2
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (0 genes)
Thalassiosira pseudonana (0 genes)
Thalassiosira oceanica (0 genes)
Pseudo-nitzschia multiseries (0 genes)
Fistulifera solaris (0 genes)
Fragilariopsis cylindrus (0 genes)
Cyclotella cryptica (0 genes)
Aureococcus anophagefferens (2 genes)
Ectocarpus siliculosus (2 genes)
Nannochloropsis gaditana (0 genes)
Homo sapiens (1 genes)
Drosophila melanogaster (1 genes)
Caenorhabditis elegans (0 genes)
Saccharomyces cerevisiae strain S288C (0 genes)
Schizosaccharomyces pombe (0 genes)
Arabidopsis thaliana (0 genes)
Cyanidioschyzon merolae (0 genes)
Chondrus crispus (0 genes)
Galdieria sulphuraria (0 genes)
Emiliania huxleyi (1 genes)
Paramecium tetraurelia (11 genes)
Seminavis robusta (0 genes)
Synedra acus (0 genes)
Physcomitrella patens (2 genes)
Chlamydomonas reinhardtii (1 genes)
Pseudo-nitzschia multistriata (0 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
Positions only
Genes only
Positions and Genes
No editing