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Interactive Phylogenetics Module
BLAST
Workbench
Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
Cre03.g144907
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
Cre03.g144907
Chlamydomonas reinhardtii
6.1e-195
681.8
476
100.0
Pp3c1_35180
Physcomitrella patens
5.6e-39
163.7
258
38.4
AT2G47210
Arabidopsis thaliana
4.8e-38
160.6
256
37.5
Pp3c2_4040
Physcomitrella patens
4.3e-31
137.5
240
35.4
SPAC9G1.13c
Schizosaccharomyces pombe
5.3e-29
130.6
231
38.1
ENSG00000178028
Homo sapiens
2.5e-26
121.7
221
35.7
WBGene00013676
Caenorhabditis elegans
3.2e-26
121.3
227
34.4
FBgn0034537
Drosophila melanogaster
7.9e-25
116.7
270
31.5
emh438080
Emiliania huxleyi
1.5e-23
112.5
242
35.5
emh738150
Emiliania huxleyi
1.3e-22
109.4
206
37.9
Ec-04_000140
Ectocarpus siliculosus
6.3e-22
107.1
286
30.4
YGR002C
Saccharomyces cerevisiae strain S288C
3.1e-21
104.8
244
29.1
gsu141210
Galdieria sulphuraria
6.9e-21
103.6
222
30.6
CM14G02570
Cyanidioschyzon merolae
1.0e-19
99.8
248
30.2
fso66730
Fistulifera solaris
1.3e-16
89.4
255
31.0
ptri146910
Phaeodactylum tricornutum
5.1e-16
87.4
271
29.9
gene2404
Fragilariopsis cylindrus
8.7e-16
86.7
179
31.3
Naga_100154g2
Nannochloropsis gaditana
1.5e-15
85.9
209
30.1
Sro1514_g278870
Seminavis robusta
9.7e-15
83.2
181
32.6
fso174960
Fistulifera solaris
2.2e-14
82.0
148
36.5
PSNMU-V1.4_AUG-EV-PASAV3_0043260
Pseudo-nitzschia multistriata
3.1e-13
78.2
255
26.3
ps00G182860
Pseudo-nitzschia multiseries
6.9e-13
77.0
188
28.7
sya00G74360
Synedra acus
4.5e-12
74.3
295
24.7
CC00G148070
Cyclotella cryptica
2.3e-08
62.0
182
25.8
pte53190
Paramecium tetraurelia
5.7e-07
57.4
110
30.0
tps61090
Thalassiosira pseudonana
7.4e-07
57.0
182
24.7
pte118250
Paramecium tetraurelia
3.7e-06
54.7
110
28.2
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (1 genes)
Thalassiosira pseudonana (1 genes)
Thalassiosira oceanica (0 genes)
Pseudo-nitzschia multiseries (1 genes)
Fistulifera solaris (2 genes)
Fragilariopsis cylindrus (1 genes)
Cyclotella cryptica (1 genes)
Aureococcus anophagefferens (0 genes)
Ectocarpus siliculosus (1 genes)
Nannochloropsis gaditana (1 genes)
Homo sapiens (1 genes)
Drosophila melanogaster (1 genes)
Caenorhabditis elegans (1 genes)
Saccharomyces cerevisiae strain S288C (1 genes)
Schizosaccharomyces pombe (1 genes)
Arabidopsis thaliana (1 genes)
Cyanidioschyzon merolae (1 genes)
Chondrus crispus (0 genes)
Galdieria sulphuraria (1 genes)
Emiliania huxleyi (2 genes)
Paramecium tetraurelia (2 genes)
Seminavis robusta (1 genes)
Synedra acus (1 genes)
Physcomitrella patens (2 genes)
Chlamydomonas reinhardtii (1 genes)
Pseudo-nitzschia multistriata (1 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
Positions only
Genes only
Positions and Genes
No editing