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Interactive Phylogenetics Module
BLAST
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Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
Cre01.g014150
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
Cre01.g014150
Chlamydomonas reinhardtii
1.3e-263
910.2
564
100.0
Cre10.g444900
Chlamydomonas reinhardtii
1.1e-78
295.8
445
38.4
Cre01.g027764
Chlamydomonas reinhardtii
1.2e-75
285.8
452
42.9
Cre01.g051211
Chlamydomonas reinhardtii
3.0e-71
271.2
458
38.4
AT5G52450
Arabidopsis thaliana
5.6e-62
240.4
442
32.6
Pp3c10_15660
Physcomitrella patens
1.8e-60
235.3
446
33.9
AT1G15180
Arabidopsis thaliana
3.4e-59
231.1
472
32.8
Pp3c2_12080
Physcomitrella patens
1.1e-57
226.1
461
32.3
Pp3c17_22040
Physcomitrella patens
1.9e-57
225.3
483
32.3
Pp3c14_17840
Physcomitrella patens
4.2e-57
224.2
446
31.6
AT1G15170
Arabidopsis thaliana
7.1e-57
223.4
442
31.9
AT1G15150
Arabidopsis thaliana
7.8e-56
219.9
442
31.7
Cre12.g499700
Chlamydomonas reinhardtii
1.7e-55
218.8
445
34.4
ENSG00000142494
Homo sapiens
1.7e-55
218.8
439
33.5
AT1G73700
Arabidopsis thaliana
3.9e-55
217.6
452
31.0
AT1G71140
Arabidopsis thaliana
1.1e-54
216.1
442
31.7
Pp3c4_16610
Physcomitrella patens
9.6e-54
213.0
440
31.1
AT1G15160
Arabidopsis thaliana
6.2e-53
210.3
442
31.0
AT1G61890
Arabidopsis thaliana
6.2e-53
210.3
484
30.0
Pp3c12_15740
Physcomitrella patens
6.2e-53
210.3
450
32.9
AT1G11670
Arabidopsis thaliana
3.1e-52
208.0
477
30.4
AT2G34360
Arabidopsis thaliana
2.0e-51
205.3
472
29.9
AT3G21690
Arabidopsis thaliana
2.6e-51
204.9
446
29.1
AT5G19700
Arabidopsis thaliana
5.8e-51
203.8
447
32.0
Pp3c1_37590
Physcomitrella patens
9.9e-51
203.0
441
31.5
Pp3c6_11630
Physcomitrella patens
1.3e-50
202.6
450
29.8
SPCC4B3.13
Schizosaccharomyces pombe
1.4e-49
199.1
467
29.1
AT1G58340
Arabidopsis thaliana
1.9e-49
198.7
445
28.8
AT1G64820
Arabidopsis thaliana
7.1e-49
196.8
446
30.3
Pp3c10_17490
Physcomitrella patens
9.3e-49
196.4
446
29.4
AT4G29140
Arabidopsis thaliana
1.2e-48
196.1
442
31.2
AT2G38510
Arabidopsis thaliana
1.6e-48
195.7
437
29.1
AT1G66780
Arabidopsis thaliana
4.6e-48
194.1
434
28.6
Pp3c10_10570
Physcomitrella patens
1.0e-47
193.0
440
29.8
AT1G23300
Arabidopsis thaliana
3.0e-47
191.4
450
29.6
Pp3c5_21630
Physcomitrella patens
1.5e-46
189.1
445
29.2
AT2G04080
Arabidopsis thaliana
3.3e-46
188.0
447
28.9
AT4G21903
Arabidopsis thaliana
7.4e-46
186.8
479
29.4
AT1G66760
Arabidopsis thaliana
9.6e-46
186.4
456
31.1
AT2G04050
Arabidopsis thaliana
2.8e-45
184.9
446
29.4
AT2G04040
Arabidopsis thaliana
3.6e-45
184.5
445
30.6
AT4G25640
Arabidopsis thaliana
6.2e-45
183.7
467
28.9
AT4G21910
Arabidopsis thaliana
8.1e-45
183.3
450
29.8
AT4G23030
Arabidopsis thaliana
9.0e-44
179.9
442
29.9
AT1G47530
Arabidopsis thaliana
3.4e-43
177.9
456
27.6
AT3G23560
Arabidopsis thaliana
4.5e-43
177.6
440
29.1
AT3G26590
Arabidopsis thaliana
1.4e-41
172.6
484
28.5
AT2G04100
Arabidopsis thaliana
1.9e-41
172.2
453
28.0
AT2G04090
Arabidopsis thaliana
2.4e-41
171.8
448
28.6
AT5G10420
Arabidopsis thaliana
2.4e-41
171.8
448
28.8
AT5G44050
Arabidopsis thaliana
3.2e-41
171.4
461
28.0
AT5G49130
Arabidopsis thaliana
3.2e-41
171.4
452
27.2
Cre03.g205850
Chlamydomonas reinhardtii
4.2e-41
171.0
605
24.1
ENSG00000180638
Homo sapiens
9.3e-41
169.9
479
27.3
AT3G23550
Arabidopsis thaliana
1.6e-40
169.1
439
27.6
AT5G65380
Arabidopsis thaliana
2.1e-40
168.7
446
29.1
AT1G12950
Arabidopsis thaliana
4.6e-40
167.5
450
28.4
AT1G71870
Arabidopsis thaliana
4.6e-40
167.5
455
29.5
Pp3c14_23000
Physcomitrella patens
4.6e-40
167.5
441
27.9
AT4G00350
Arabidopsis thaliana
1.3e-39
166.0
443
28.0
AT5G38030
Arabidopsis thaliana
6.7e-39
163.7
443
28.7
Sro15_g011090
Seminavis robusta
6.7e-39
163.7
449
27.8
Cre14.g625350
Chlamydomonas reinhardtii
2.5e-38
161.8
441
28.8
AT3G59030
Arabidopsis thaliana
9.6e-38
159.8
488
28.5
gsu135060
Galdieria sulphuraria
1.3e-37
159.5
428
30.1
AT3G03620
Arabidopsis thaliana
2.1e-37
158.7
474
28.7
Pp3c1_37630
Physcomitrella patens
2.4e-36
155.2
341
31.7
AT1G33110
Arabidopsis thaliana
5.3e-36
154.1
473
28.3
Cre12.g523250
Chlamydomonas reinhardtii
9.0e-36
153.3
452
29.0
AT1G33080
Arabidopsis thaliana
1.5e-35
152.5
450
33.3
AT5G52050
Arabidopsis thaliana
1.5e-35
152.5
447
26.4
AT4G22790
Arabidopsis thaliana
2.6e-35
151.8
444
26.6
AT2G04070
Arabidopsis thaliana
3.4e-35
151.4
445
27.6
AT1G33100
Arabidopsis thaliana
4.5e-35
151.0
450
27.8
AT1G33090
Arabidopsis thaliana
7.6e-35
150.2
450
28.4
AA0058G00220
Aureococcus anophagefferens
1.8e-31
139.0
367
29.4
SPAC323.07c
Schizosaccharomyces pombe
1.1e-30
136.3
443
26.9
YDR338C
Saccharomyces cerevisiae strain S288C
1.9e-30
135.6
442
25.8
SPAC11D3.06
Schizosaccharomyces pombe
2.1e-29
132.1
438
25.8
Cre10.g445850
Chlamydomonas reinhardtii
1.2e-24
116.3
467
25.5
emh649060
Emiliania huxleyi
1.6e-24
115.9
406
28.1
sya00G08940
Synedra acus
2.1e-24
115.5
511
23.7
Ec-23_000920
Ectocarpus siliculosus
6.1e-24
114.0
398
26.4
Sro1515_g279010
Seminavis robusta
1.3e-23
112.8
516
25.4
YHR032W
Saccharomyces cerevisiae strain S288C
1.8e-23
112.5
422
24.2
tps31150
Thalassiosira pseudonana
6.7e-23
110.5
385
25.2
tho116900
Thalassiosira oceanica
8.7e-23
110.2
461
24.5
ps00G80310
Pseudo-nitzschia multiseries
1.1e-22
109.8
393
27.2
CC00G60790
Cyclotella cryptica
1.9e-22
109.0
517
24.6
emh543580
Emiliania huxleyi
6.3e-21
104.0
433
27.3
gene15027
Fragilariopsis cylindrus
1.1e-20
103.2
381
25.5
fso93520
Fistulifera solaris
2.4e-20
102.1
491
25.3
PSNMU-V1.4_AUG-EV-PASAV3_0041320
Pseudo-nitzschia multistriata
2.4e-20
102.1
396
26.0
AT5G17700
Arabidopsis thaliana
5.3e-20
100.9
448
23.2
CC00G114010
Cyclotella cryptica
6.9e-20
100.5
456
24.8
emh446400
Emiliania huxleyi
2.0e-19
99.0
485
26.6
emh230720
Emiliania huxleyi
2.0e-19
99.0
485
26.6
fso158870
Fistulifera solaris
4.5e-19
97.8
469
26.2
emh649740
Emiliania huxleyi
3.8e-18
94.7
498
25.5
emh201200
Emiliania huxleyi
3.8e-18
94.7
498
25.5
CM09G02580
Cyanidioschyzon merolae
4.6e-16
87.8
531
27.3
ptri160050
Phaeodactylum tricornutum
3.9e-15
84.7
427
26.7
Naga_100053g11
Nannochloropsis gaditana
8.8e-15
83.6
211
28.0
tho242420
Thalassiosira oceanica
1.5e-14
82.8
378
25.9
Sro47_g027780
Seminavis robusta
7.4e-14
80.5
453
23.0
PSNMU-V1.4_AUG-EV-PASAV3_0034450
Pseudo-nitzschia multistriata
1.4e-12
76.3
467
25.7
tho01400
Thalassiosira oceanica
2.4e-12
75.5
226
24.8
tho486100
Thalassiosira oceanica
4.1e-12
74.7
329
23.4
emh273130
Emiliania huxleyi
5.3e-12
74.3
274
24.8
emh68340
Emiliania huxleyi
9.1e-12
73.6
274
24.1
emh654810
Emiliania huxleyi
1.2e-11
73.2
319
21.9
ptri147330
Phaeodactylum tricornutum
1.5e-11
72.8
442
23.5
emh703360
Emiliania huxleyi
2.0e-11
72.4
274
23.7
emh763410
Emiliania huxleyi
2.6e-11
72.0
377
24.9
CC00G182610
Cyclotella cryptica
1.3e-10
69.7
225
27.6
tho117820
Thalassiosira oceanica
2.2e-10
68.9
223
24.2
emh425820
Emiliania huxleyi
2.9e-10
68.6
458
21.2
fso169670
Fistulifera solaris
2.9e-10
68.6
460
22.8
Sro514_g158000
Seminavis robusta
6.5e-10
67.4
447
25.5
ps00G102360
Pseudo-nitzschia multiseries
1.4e-09
66.2
428
23.8
ptri70910
Phaeodactylum tricornutum
1.4e-09
66.2
307
25.1
AT2G04066
Arabidopsis thaliana
4.2e-09
64.7
102
34.3
fso14910
Fistulifera solaris
4.2e-09
64.7
423
23.9
fso134100
Fistulifera solaris
9.4e-09
63.5
431
24.4
Sro1442_g273080
Seminavis robusta
4.7e-08
61.2
450
21.1
sya00G144770
Synedra acus
2.3e-07
58.9
458
22.9
Cre01.g007901
Chlamydomonas reinhardtii
3.0e-07
58.5
211
22.3
tho202780
Thalassiosira oceanica
2.6e-06
55.5
496
23.2
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (3 genes)
Thalassiosira pseudonana (1 genes)
Thalassiosira oceanica (6 genes)
Pseudo-nitzschia multiseries (2 genes)
Fistulifera solaris (5 genes)
Fragilariopsis cylindrus (1 genes)
Cyclotella cryptica (3 genes)
Aureococcus anophagefferens (1 genes)
Ectocarpus siliculosus (1 genes)
Nannochloropsis gaditana (1 genes)
Homo sapiens (2 genes)
Drosophila melanogaster (0 genes)
Caenorhabditis elegans (0 genes)
Saccharomyces cerevisiae strain S288C (2 genes)
Schizosaccharomyces pombe (3 genes)
Arabidopsis thaliana (51 genes)
Cyanidioschyzon merolae (1 genes)
Chondrus crispus (0 genes)
Galdieria sulphuraria (1 genes)
Emiliania huxleyi (12 genes)
Paramecium tetraurelia (0 genes)
Seminavis robusta (5 genes)
Synedra acus (2 genes)
Physcomitrella patens (13 genes)
Chlamydomonas reinhardtii (10 genes)
Pseudo-nitzschia multistriata (2 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
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