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Interactive Phylogenetics Module
BLAST
Workbench
Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
CM14G02570
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
CM14G02570
Cyanidioschyzon merolae
9.9e-236
817.4
503
100.0
gsu141210
Galdieria sulphuraria
1.4e-35
152.5
364
30.8
AT2G47210
Arabidopsis thaliana
6.0e-23
110.5
462
27.1
Pp3c1_35180
Physcomitrella patens
1.5e-21
105.9
428
40.0
FBgn0034537
Drosophila melanogaster
1.6e-20
102.4
434
26.7
ENSG00000178028
Homo sapiens
4.7e-20
100.9
422
38.4
Pp3c2_4040
Physcomitrella patens
2.0e-18
95.5
189
35.4
Cre03.g144907
Chlamydomonas reinhardtii
2.9e-17
91.7
248
30.2
WBGene00013676
Caenorhabditis elegans
9.6e-13
76.6
299
26.8
SPAC9G1.13c
Schizosaccharomyces pombe
1.2e-12
76.3
278
29.9
emh738150
Emiliania huxleyi
3.1e-11
71.6
222
30.2
ptri146910
Phaeodactylum tricornutum
1.2e-10
69.7
201
26.4
fso174960
Fistulifera solaris
3.4e-10
68.2
264
26.5
fso66730
Fistulifera solaris
7.6e-10
67.0
251
26.7
Ec-04_000140
Ectocarpus siliculosus
9.9e-10
66.6
295
27.5
sya00G74360
Synedra acus
8.4e-09
63.5
479
21.5
tps61090
Thalassiosira pseudonana
1.9e-08
62.4
189
28.0
gene2404
Fragilariopsis cylindrus
3.2e-08
61.6
491
19.8
emh438080
Emiliania huxleyi
9.3e-08
60.1
194
30.4
YGR002C
Saccharomyces cerevisiae strain S288C
1.0e-06
56.6
306
22.5
CC00G148070
Cyclotella cryptica
1.3e-06
56.2
163
28.2
PSNMU-V1.4_AUG-EV-PASAV3_0043260
Pseudo-nitzschia multistriata
2.3e-06
55.5
245
24.5
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (1 genes)
Thalassiosira pseudonana (1 genes)
Thalassiosira oceanica (0 genes)
Pseudo-nitzschia multiseries (0 genes)
Fistulifera solaris (2 genes)
Fragilariopsis cylindrus (1 genes)
Cyclotella cryptica (1 genes)
Aureococcus anophagefferens (0 genes)
Ectocarpus siliculosus (1 genes)
Nannochloropsis gaditana (0 genes)
Homo sapiens (1 genes)
Drosophila melanogaster (1 genes)
Caenorhabditis elegans (1 genes)
Saccharomyces cerevisiae strain S288C (1 genes)
Schizosaccharomyces pombe (1 genes)
Arabidopsis thaliana (1 genes)
Cyanidioschyzon merolae (1 genes)
Chondrus crispus (0 genes)
Galdieria sulphuraria (1 genes)
Emiliania huxleyi (2 genes)
Paramecium tetraurelia (0 genes)
Seminavis robusta (0 genes)
Synedra acus (1 genes)
Physcomitrella patens (2 genes)
Chlamydomonas reinhardtii (1 genes)
Pseudo-nitzschia multistriata (1 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
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Genes only
Positions and Genes
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