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Interactive Phylogenetics Module
BLAST
Workbench
Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
CM10G01580
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
CM10G01580
Cyanidioschyzon merolae
2.3e-202
706.1
367
100.0
gsu83710
Galdieria sulphuraria
7.4e-55
216.1
317
40.4
Pp3c20_6890
Physcomitrella patens
6.5e-43
176.4
343
34.1
Pp3c20_6180
Physcomitrella patens
6.1e-41
169.9
335
34.3
AT5G62500
Arabidopsis thaliana
1.8e-40
168.3
301
33.9
ENSG00000084764
Homo sapiens
1.9e-39
164.9
289
35.3
AT3G47690
Arabidopsis thaliana
1.1e-37
159.1
301
34.2
Pp3c23_19790
Physcomitrella patens
4.1e-37
157.1
336
32.1
Pp3c23_19930
Physcomitrella patens
4.1e-37
157.1
336
32.1
ENSG00000101367
Homo sapiens
3.4e-36
154.1
300
33.3
AT5G67270
Arabidopsis thaliana
5.9e-36
153.3
299
33.4
FBgn0027066
Drosophila melanogaster
7.2e-34
146.4
293
33.4
Ec-03_003870
Ectocarpus siliculosus
7.2e-34
146.4
129
51.2
ptri164890
Phaeodactylum tricornutum
9.4e-34
146.0
285
34.4
PSNMU-V1.4_AUG-EV-PASAV3_0064780
Pseudo-nitzschia multistriata
2.1e-33
144.8
285
35.1
Cre17.g741200
Chlamydomonas reinhardtii
5.1e-32
140.2
297
31.6
ENSG00000166974
Homo sapiens
3.3e-31
137.5
285
29.8
Sro352_g124310
Seminavis robusta
7.4e-31
136.3
282
32.6
gene6271
Fragilariopsis cylindrus
1.7e-30
135.2
367
28.1
pte143680
Paramecium tetraurelia
2.2e-30
134.8
164
43.3
pte793090
Paramecium tetraurelia
2.4e-29
131.3
116
49.1
pte726330
Paramecium tetraurelia
3.1e-29
131.0
116
49.1
pte247370
Paramecium tetraurelia
5.3e-29
130.2
165
41.8
CC00G183150
Cyclotella cryptica
9.1e-29
129.4
113
50.4
ps00G157900
Pseudo-nitzschia multiseries
1.5e-28
128.6
152
43.4
tps203150
Thalassiosira pseudonana
5.9e-28
126.7
110
50.0
Naga_100010g74
Nannochloropsis gaditana
1.0e-27
125.9
281
29.5
YER016W
Saccharomyces cerevisiae strain S288C
1.7e-27
125.2
274
34.7
FBgn0052371
Drosophila melanogaster
4.2e-26
120.6
119
45.4
AA0026G00490
Aureococcus anophagefferens
1.2e-25
119.0
111
46.8
SPAC18G6.15
Schizosaccharomyces pombe
1.6e-25
118.6
329
29.2
fso141850
Fistulifera solaris
6.1e-25
116.7
289
32.9
fso138610
Fistulifera solaris
8.8e-24
112.8
298
30.9
Cre17.g720500
Chlamydomonas reinhardtii
3.1e-21
104.4
123
40.7
WBGene00013344
Caenorhabditis elegans
2.6e-20
101.3
291
27.5
WBGene00012156
Caenorhabditis elegans
1.7e-19
98.6
147
38.1
FBgn0034403
Drosophila melanogaster
3.8e-19
97.4
102
38.2
pte103730
Paramecium tetraurelia
2.5e-18
94.7
95
43.2
pte37220
Paramecium tetraurelia
3.2e-18
94.4
95
42.1
emh211840
Emiliania huxleyi
1.6e-17
92.0
332
26.5
FBgn0031585
Drosophila melanogaster
5.7e-15
83.6
101
38.6
FBgn0030191
Drosophila melanogaster
4.8e-14
80.5
183
30.1
pte249850
Paramecium tetraurelia
4.8e-14
80.5
102
33.3
emh167350
Emiliania huxleyi
1.7e-11
72.0
80
40.0
pte713850
Paramecium tetraurelia
8.5e-11
69.7
83
32.5
pte211460
Paramecium tetraurelia
1.6e-09
65.5
97
24.7
pte298580
Paramecium tetraurelia
1.6e-09
65.5
106
24.5
tho453840
Thalassiosira oceanica
8.0e-09
63.2
52
50.0
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (1 genes)
Thalassiosira pseudonana (1 genes)
Thalassiosira oceanica (1 genes)
Pseudo-nitzschia multiseries (1 genes)
Fistulifera solaris (2 genes)
Fragilariopsis cylindrus (1 genes)
Cyclotella cryptica (1 genes)
Aureococcus anophagefferens (1 genes)
Ectocarpus siliculosus (1 genes)
Nannochloropsis gaditana (1 genes)
Homo sapiens (3 genes)
Drosophila melanogaster (5 genes)
Caenorhabditis elegans (2 genes)
Saccharomyces cerevisiae strain S288C (1 genes)
Schizosaccharomyces pombe (1 genes)
Arabidopsis thaliana (3 genes)
Cyanidioschyzon merolae (1 genes)
Chondrus crispus (0 genes)
Galdieria sulphuraria (1 genes)
Emiliania huxleyi (2 genes)
Paramecium tetraurelia (10 genes)
Seminavis robusta (1 genes)
Synedra acus (0 genes)
Physcomitrella patens (4 genes)
Chlamydomonas reinhardtii (2 genes)
Pseudo-nitzschia multistriata (1 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
Positions only
Genes only
Positions and Genes
No editing