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Interactive Phylogenetics Module
BLAST
Workbench
Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
CC00G96620
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
CC00G96620
Cyclotella cryptica
4.5e-267
921.4
468
100.0
tho162340
Thalassiosira oceanica
1.3e-136
488.0
436
59.6
tps187450
Thalassiosira pseudonana
3.5e-110
400.2
240
81.2
Sro23_g016030
Seminavis robusta
7.2e-63
243.0
234
49.6
fso117070
Fistulifera solaris
9.1e-58
226.1
305
40.0
YDR331W
Saccharomyces cerevisiae strain S288C
1.5e-57
225.3
307
42.0
Ec-11_001670
Ectocarpus siliculosus
1.0e-56
222.6
279
41.2
Pp3c9_23730
Physcomitrella patens
2.9e-56
221.1
231
46.8
AT1G08750
Arabidopsis thaliana
5.0e-56
220.3
229
47.2
fso73010
Fistulifera solaris
6.5e-56
219.9
227
48.5
ptri26240
Phaeodactylum tricornutum
7.2e-55
216.5
403
36.5
FBgn0023545
Drosophila melanogaster
6.1e-54
213.4
335
38.2
SPCC11E10.02c
Schizosaccharomyces pombe
8.8e-53
209.5
263
42.6
WBGene00011482
Caenorhabditis elegans
4.4e-52
207.2
233
45.9
gene405
Fragilariopsis cylindrus
7.4e-52
206.5
212
45.3
sya00G81650
Synedra acus
5.3e-50
200.3
243
44.0
ENSG00000142892
Homo sapiens
2.9e-48
194.5
227
44.5
Cre03.g153800
Chlamydomonas reinhardtii
1.9e-47
191.8
332
35.2
ps00G117520
Pseudo-nitzschia multiseries
2.7e-46
188.0
401
30.7
Naga_100171g6
Nannochloropsis gaditana
5.9e-41
170.2
234
39.3
AA0006G05470
Aureococcus anophagefferens
1.3e-32
142.5
232
35.3
PSNMU-V1.4_AUG-EV-PASAV3_0042360
Pseudo-nitzschia multistriata
5.7e-28
127.1
177
37.3
pte653990
Paramecium tetraurelia
2.5e-23
111.7
239
29.3
WBGene00012144
Caenorhabditis elegans
4.3e-23
110.9
204
29.4
pte462720
Paramecium tetraurelia
1.8e-21
105.5
201
30.8
pte606940
Paramecium tetraurelia
6.8e-21
103.6
175
31.4
pte397850
Paramecium tetraurelia
8.9e-21
103.2
336
25.6
AT3G20210
Arabidopsis thaliana
5.8e-20
100.5
221
27.6
ENSG00000100600
Homo sapiens
4.9e-19
97.4
257
26.8
Pp3c14_12150
Physcomitrella patens
6.4e-19
97.1
193
31.1
AT2G25940
Arabidopsis thaliana
8.3e-19
96.7
229
28.8
Ec-18_001600
Ectocarpus siliculosus
4.1e-18
94.4
225
26.2
Pp3c24_12090
Physcomitrella patens
6.0e-17
90.5
169
29.6
AA0023G00940
Aureococcus anophagefferens
1.7e-16
89.0
175
31.4
Pp3c8_16430
Physcomitrella patens
1.5e-15
85.9
230
25.7
Pp3c20_10970
Physcomitrella patens
3.3e-15
84.7
243
23.5
AT4G32940
Arabidopsis thaliana
4.3e-15
84.3
210
24.3
Cre12.g483550
Chlamydomonas reinhardtii
7.3e-15
83.6
259
25.9
AT1G62710
Arabidopsis thaliana
2.1e-14
82.0
202
26.7
Pp3c15_22470
Physcomitrella patens
3.3e-07
58.2
108
35.2
emh358140
Emiliania huxleyi
7.3e-07
57.0
106
32.1
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (1 genes)
Thalassiosira pseudonana (1 genes)
Thalassiosira oceanica (1 genes)
Pseudo-nitzschia multiseries (1 genes)
Fistulifera solaris (2 genes)
Fragilariopsis cylindrus (1 genes)
Cyclotella cryptica (1 genes)
Aureococcus anophagefferens (2 genes)
Ectocarpus siliculosus (2 genes)
Nannochloropsis gaditana (1 genes)
Homo sapiens (2 genes)
Drosophila melanogaster (1 genes)
Caenorhabditis elegans (2 genes)
Saccharomyces cerevisiae strain S288C (1 genes)
Schizosaccharomyces pombe (1 genes)
Arabidopsis thaliana (5 genes)
Cyanidioschyzon merolae (0 genes)
Chondrus crispus (0 genes)
Galdieria sulphuraria (0 genes)
Emiliania huxleyi (1 genes)
Paramecium tetraurelia (4 genes)
Seminavis robusta (1 genes)
Synedra acus (1 genes)
Physcomitrella patens (6 genes)
Chlamydomonas reinhardtii (2 genes)
Pseudo-nitzschia multistriata (1 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
Positions only
Genes only
Positions and Genes
No editing