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Interactive Phylogenetics Module
BLAST
Workbench
Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
CC00G95020
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
CC00G95020
Cyclotella cryptica
6.4e-294
1010.7
526
100.0
CC00G133790
Cyclotella cryptica
5.0e-190
665.6
507
62.3
ptri47850
Phaeodactylum tricornutum
6.7e-142
505.8
518
50.4
ps00G57480
Pseudo-nitzschia multiseries
5.6e-141
502.7
529
49.3
Sro2261_g321150
Seminavis robusta
3.7e-140
500.0
525
49.3
fso27200
Fistulifera solaris
2.6e-138
493.8
525
49.9
fso49480
Fistulifera solaris
3.8e-137
490.0
525
49.3
tps212020
Thalassiosira pseudonana
2.0e-117
424.5
329
63.5
PSNMU-V1.4_AUG-EV-PASAV3_0062170
Pseudo-nitzschia multistriata
5.0e-113
409.8
506
44.7
sya00G64440
Synedra acus
3.1e-107
390.6
507
43.4
sya00G172000
Synedra acus
3.7e-92
340.5
511
40.7
gene3451
Fragilariopsis cylindrus
1.1e-91
339.0
329
50.5
CC00G79370
Cyclotella cryptica
1.8e-91
338.2
514
38.3
tps73080
Thalassiosira pseudonana
2.3e-89
331.3
515
36.7
gene7251
Fragilariopsis cylindrus
3.3e-80
300.8
330
47.3
Cre13.g565600
Chlamydomonas reinhardtii
8.1e-63
243.0
489
33.9
ptri205380
Phaeodactylum tricornutum
6.8e-54
213.4
501
31.3
AA0001G01220
Aureococcus anophagefferens
3.4e-53
211.1
477
32.5
sya00G228240
Synedra acus
2.2e-52
208.4
397
33.5
tho21620
Thalassiosira oceanica
1.7e-36
155.6
236
39.4
emh29350
Emiliania huxleyi
1.6e-31
139.0
219
39.3
pte501940
Paramecium tetraurelia
1.2e-10
69.7
150
30.0
pte674870
Paramecium tetraurelia
6.1e-10
67.4
150
28.7
ENSG00000135049
Homo sapiens
7.9e-10
67.0
287
25.1
pte779620
Paramecium tetraurelia
2.0e-08
62.4
166
22.3
pte577730
Paramecium tetraurelia
4.3e-08
61.2
112
29.5
pte622160
Paramecium tetraurelia
3.7e-07
58.2
144
29.9
ENSG00000084693
Homo sapiens
6.3e-07
57.4
85
35.3
ENSG00000146856
Homo sapiens
8.2e-07
57.0
295
22.7
pte428270
Paramecium tetraurelia
8.2e-07
57.0
185
24.3
pte408580
Paramecium tetraurelia
1.4e-06
56.2
104
32.7
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (2 genes)
Thalassiosira pseudonana (2 genes)
Thalassiosira oceanica (1 genes)
Pseudo-nitzschia multiseries (1 genes)
Fistulifera solaris (2 genes)
Fragilariopsis cylindrus (2 genes)
Cyclotella cryptica (3 genes)
Aureococcus anophagefferens (1 genes)
Ectocarpus siliculosus (0 genes)
Nannochloropsis gaditana (0 genes)
Homo sapiens (3 genes)
Drosophila melanogaster (0 genes)
Caenorhabditis elegans (0 genes)
Saccharomyces cerevisiae strain S288C (0 genes)
Schizosaccharomyces pombe (0 genes)
Arabidopsis thaliana (0 genes)
Cyanidioschyzon merolae (0 genes)
Chondrus crispus (0 genes)
Galdieria sulphuraria (0 genes)
Emiliania huxleyi (1 genes)
Paramecium tetraurelia (7 genes)
Seminavis robusta (1 genes)
Synedra acus (3 genes)
Physcomitrella patens (0 genes)
Chlamydomonas reinhardtii (1 genes)
Pseudo-nitzschia multistriata (1 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
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Positions and Genes
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