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Interactive Phylogenetics Module
BLAST
Workbench
Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
CC00G89710
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
CC00G89710
Cyclotella cryptica
1.1e-301
1036.6
528
100.0
tps185400
Thalassiosira pseudonana
4.3e-213
742.3
523
73.6
tho442080
Thalassiosira oceanica
1.3e-81
305.4
389
50.1
tho533300
Thalassiosira oceanica
1.4e-51
205.7
141
75.9
sya00G18890
Synedra acus
4.0e-38
161.0
328
36.3
sya00G110720
Synedra acus
2.2e-36
155.2
305
35.4
tho100220
Thalassiosira oceanica
6.7e-33
143.7
391
30.9
ptri33490
Phaeodactylum tricornutum
5.7e-32
140.6
388
26.8
sya00G05800
Synedra acus
2.2e-31
138.7
314
29.3
CC00G44560
Cyclotella cryptica
3.8e-28
127.9
307
30.6
tps97260
Thalassiosira pseudonana
1.1e-27
126.3
302
31.5
emh364780
Emiliania huxleyi
1.2e-26
122.9
317
33.1
emh208700
Emiliania huxleyi
1.2e-26
122.9
317
33.1
tps197070
Thalassiosira pseudonana
1.6e-26
122.5
378
28.8
CC00G140810
Cyclotella cryptica
2.5e-24
115.2
314
29.6
Sro24_g016520
Seminavis robusta
7.4e-24
113.6
304
28.3
Sro384_g131560
Seminavis robusta
1.4e-22
109.4
358
27.4
ps00G77870
Pseudo-nitzschia multiseries
2.6e-21
105.1
269
28.3
PSNMU-V1.4_AUG-EV-PASAV3_0031490
Pseudo-nitzschia multistriata
3.4e-21
104.8
286
27.6
ps00G81460
Pseudo-nitzschia multiseries
4.5e-21
104.4
237
32.1
gene6745
Fragilariopsis cylindrus
7.7e-21
103.6
302
28.8
fso32920
Fistulifera solaris
1.3e-20
102.8
252
31.3
gene10609
Fragilariopsis cylindrus
1.7e-20
102.4
323
26.6
fso32910
Fistulifera solaris
5.0e-20
100.9
305
26.6
Sro2572_g331630
Seminavis robusta
5.0e-20
100.9
302
27.2
Sro2572_g331640
Seminavis robusta
8.5e-20
100.1
310
26.8
sya00G182720
Synedra acus
2.5e-19
98.6
207
30.9
Sro248_g098300
Seminavis robusta
4.2e-19
97.8
259
30.9
Sro212_g088210
Seminavis robusta
7.2e-19
97.1
249
26.9
Sro2572_g331650
Seminavis robusta
1.6e-18
95.9
255
29.0
sya00G221850
Synedra acus
1.6e-18
95.9
235
34.5
Sro2040_g312180
Seminavis robusta
3.6e-18
94.7
255
28.6
fso136220
Fistulifera solaris
1.0e-17
93.2
251
33.5
Sro515_g158260
Seminavis robusta
5.1e-17
90.9
321
24.9
fso29870
Fistulifera solaris
6.7e-17
90.5
397
22.7
fso38820
Fistulifera solaris
6.7e-17
90.5
276
25.7
fso59760
Fistulifera solaris
1.1e-16
89.7
289
26.6
emh400820
Emiliania huxleyi
1.5e-16
89.4
370
24.1
emh344920
Emiliania huxleyi
1.5e-16
89.4
370
24.1
fso32950
Fistulifera solaris
2.6e-16
88.6
326
25.8
fso18370
Fistulifera solaris
3.3e-16
88.2
368
23.4
Sro50_g029070
Seminavis robusta
3.3e-16
88.2
215
28.4
ps00G43480
Pseudo-nitzschia multiseries
4.4e-16
87.8
345
24.3
fso121150
Fistulifera solaris
9.7e-16
86.7
288
26.7
fso32890
Fistulifera solaris
1.7e-15
85.9
264
26.9
fso136230
Fistulifera solaris
1.7e-15
85.9
322
28.6
Sro515_g158330
Seminavis robusta
1.7e-15
85.9
244
27.0
Sro3533_g349030
Seminavis robusta
2.2e-15
85.5
282
28.4
PSNMU-V1.4_AUG-EV-PASAV3_0088920
Pseudo-nitzschia multistriata
4.8e-15
84.3
299
22.7
AA0003G03700
Aureococcus anophagefferens
1.1e-14
83.2
247
28.7
Sro78_g042490
Seminavis robusta
1.4e-14
82.8
310
23.9
fso193490
Fistulifera solaris
2.4e-14
82.0
282
25.2
Sro65_g037010
Seminavis robusta
4.1e-14
81.3
344
28.2
tho290640
Thalassiosira oceanica
4.1e-14
81.3
288
26.7
fso32900
Fistulifera solaris
1.2e-13
79.7
385
24.4
PSNMU-V1.4_AUG-EV-PASAV3_0006770
Pseudo-nitzschia multistriata
5.9e-13
77.4
204
29.9
Sro1573_g283460
Seminavis robusta
5.9e-13
77.4
293
24.2
AA0003G03740
Aureococcus anophagefferens
1.7e-12
75.9
330
27.0
PSNMU-V1.4_AUG-EV-PASAV3_0028200
Pseudo-nitzschia multistriata
2.9e-12
75.1
127
30.7
PSNMU-V1.4_AUG-EV-PASAV3_0088070
Pseudo-nitzschia multistriata
1.1e-11
73.2
174
28.7
ps00G53020
Pseudo-nitzschia multiseries
1.1e-11
73.2
208
29.8
tps03030
Thalassiosira pseudonana
2.5e-11
72.0
264
27.7
gene11568
Fragilariopsis cylindrus
5.5e-11
70.9
220
29.1
Sro484_g152250
Seminavis robusta
7.2e-11
70.5
96
42.7
fso32940
Fistulifera solaris
2.7e-10
68.6
272
24.3
Sro2985_g341630
Seminavis robusta
3.6e-10
68.2
399
24.3
Sro477_g150700
Seminavis robusta
5.7e-08
60.8
148
26.4
Sro773_g200410
Seminavis robusta
4.1e-06
54.7
93
28.0
Sro2096_g314260
Seminavis robusta
4.1e-06
54.7
94
38.3
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (1 genes)
Thalassiosira pseudonana (4 genes)
Thalassiosira oceanica (4 genes)
Pseudo-nitzschia multiseries (4 genes)
Fistulifera solaris (14 genes)
Fragilariopsis cylindrus (3 genes)
Cyclotella cryptica (3 genes)
Aureococcus anophagefferens (2 genes)
Ectocarpus siliculosus (0 genes)
Nannochloropsis gaditana (0 genes)
Homo sapiens (0 genes)
Drosophila melanogaster (0 genes)
Caenorhabditis elegans (0 genes)
Saccharomyces cerevisiae strain S288C (0 genes)
Schizosaccharomyces pombe (0 genes)
Arabidopsis thaliana (0 genes)
Cyanidioschyzon merolae (0 genes)
Chondrus crispus (0 genes)
Galdieria sulphuraria (0 genes)
Emiliania huxleyi (4 genes)
Paramecium tetraurelia (0 genes)
Seminavis robusta (20 genes)
Synedra acus (5 genes)
Physcomitrella patens (0 genes)
Chlamydomonas reinhardtii (0 genes)
Pseudo-nitzschia multistriata (5 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
Positions only
Genes only
Positions and Genes
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