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Interactive Phylogenetics Module
BLAST
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Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
CC00G89560
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
CC00G89560
Cyclotella cryptica
1.3e-169
597.0
304
100.0
CC00G17610
Cyclotella cryptica
8.8e-70
265.4
142
91.5
CC00G37390
Cyclotella cryptica
1.5e-69
264.6
142
90.8
CC00G00700
Cyclotella cryptica
4.4e-69
263.1
160
80.0
CC00G120870
Cyclotella cryptica
4.4e-69
263.1
160
80.0
CC00G166190
Cyclotella cryptica
1.2e-66
255.0
141
88.7
CC00G101490
Cyclotella cryptica
1.5e-66
254.6
142
88.7
CC00G37400
Cyclotella cryptica
2.3e-62
240.7
150
82.0
CC00G207500
Cyclotella cryptica
3.0e-62
240.4
162
79.6
CC00G190760
Cyclotella cryptica
2.7e-55
217.2
140
78.6
CC00G189800
Cyclotella cryptica
1.1e-40
168.7
100
81.0
CC00G161440
Cyclotella cryptica
1.7e-36
154.8
142
54.9
CC00G144660
Cyclotella cryptica
1.2e-26
122.1
111
55.0
CC00G108090
Cyclotella cryptica
2.8e-23
110.9
80
71.2
CC00G45280
Cyclotella cryptica
7.5e-21
102.8
54
85.2
CC00G160940
Cyclotella cryptica
1.6e-18
95.1
56
78.6
tho633240
Thalassiosira oceanica
1.6e-18
95.1
82
51.2
CC00G149300
Cyclotella cryptica
7.8e-18
92.8
60
63.3
tho86000
Thalassiosira oceanica
1.7e-17
91.7
124
41.1
tho158140
Thalassiosira oceanica
1.5e-16
88.6
75
53.3
CC00G35440
Cyclotella cryptica
1.9e-16
88.2
46
91.3
tho89800
Thalassiosira oceanica
1.2e-15
85.5
140
35.7
sya00G170370
Synedra acus
3.1e-14
80.9
88
39.8
tho187160
Thalassiosira oceanica
1.5e-13
78.6
92
46.7
tho158160
Thalassiosira oceanica
1.3e-12
75.5
88
46.6
tho155000
Thalassiosira oceanica
4.9e-12
73.6
78
48.7
sya00G110500
Synedra acus
1.0e-09
65.9
78
35.9
sya00G266280
Synedra acus
1.9e-08
61.6
60
41.7
sya00G28400
Synedra acus
3.3e-08
60.8
61
44.3
sya00G90200
Synedra acus
2.8e-07
57.8
97
35.1
ptri237730
Phaeodactylum tricornutum
1.1e-06
55.8
80
32.5
sya00G151100
Synedra acus
1.4e-06
55.5
52
42.3
sya00G15730
Synedra acus
1.8e-06
55.1
61
36.1
sya00G152450
Synedra acus
4.0e-06
53.9
59
39.0
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (1 genes)
Thalassiosira pseudonana (0 genes)
Thalassiosira oceanica (7 genes)
Pseudo-nitzschia multiseries (0 genes)
Fistulifera solaris (0 genes)
Fragilariopsis cylindrus (0 genes)
Cyclotella cryptica (18 genes)
Aureococcus anophagefferens (0 genes)
Ectocarpus siliculosus (0 genes)
Nannochloropsis gaditana (0 genes)
Homo sapiens (0 genes)
Drosophila melanogaster (0 genes)
Caenorhabditis elegans (0 genes)
Saccharomyces cerevisiae strain S288C (0 genes)
Schizosaccharomyces pombe (0 genes)
Arabidopsis thaliana (0 genes)
Cyanidioschyzon merolae (0 genes)
Chondrus crispus (0 genes)
Galdieria sulphuraria (0 genes)
Emiliania huxleyi (0 genes)
Paramecium tetraurelia (0 genes)
Seminavis robusta (0 genes)
Synedra acus (8 genes)
Physcomitrella patens (0 genes)
Chlamydomonas reinhardtii (0 genes)
Pseudo-nitzschia multistriata (0 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
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Genes only
Positions and Genes
No editing