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Interactive Phylogenetics Module
BLAST
Workbench
Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
CC00G87580
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
CC00G87580
Cyclotella cryptica
0.0e+00
2409.8
1293
100.0
CC00G177980
Cyclotella cryptica
0.0e+00
2028.4
1296
82.4
CC00G139280
Cyclotella cryptica
0.0e+00
1146.3
1309
50.0
CC00G110590
Cyclotella cryptica
0.0e+00
1131.7
1306
48.9
CC00G183890
Cyclotella cryptica
0.0e+00
1090.1
1330
48.8
CC00G205450
Cyclotella cryptica
0.0e+00
1085.5
1267
52.1
CC00G28500
Cyclotella cryptica
0.0e+00
1077.0
1308
47.5
CC00G67280
Cyclotella cryptica
2.8e-306
1053.1
1302
47.8
tho02320
Thalassiosira oceanica
6.8e-297
1021.9
944
54.3
tho146100
Thalassiosira oceanica
2.4e-281
970.3
966
51.9
CC00G168030
Cyclotella cryptica
7.7e-200
699.5
1144
41.0
tho225040
Thalassiosira oceanica
3.7e-178
627.5
1023
36.9
tho24160
Thalassiosira oceanica
1.2e-163
579.3
1027
35.8
tho15640
Thalassiosira oceanica
3.6e-157
557.8
996
35.7
tho269800
Thalassiosira oceanica
4.8e-149
530.8
712
41.2
tho113620
Thalassiosira oceanica
6.0e-144
513.8
731
38.6
CC00G84140
Cyclotella cryptica
4.3e-126
454.5
321
65.1
CC00G178120
Cyclotella cryptica
3.7e-117
424.9
282
74.8
tho54340
Thalassiosira oceanica
2.5e-113
412.1
623
37.9
tho400500
Thalassiosira oceanica
1.4e-100
369.8
635
36.1
tps233970
Thalassiosira pseudonana
6.1e-72
274.6
380
38.2
Sro1223_g253920
Seminavis robusta
1.4e-63
246.9
707
28.3
tho31100
Thalassiosira oceanica
6.8e-63
244.6
388
38.1
CC00G110470
Cyclotella cryptica
2.0e-62
243.0
148
77.7
tho11860
Thalassiosira oceanica
7.3e-49
198.0
380
31.1
tho207000
Thalassiosira oceanica
2.4e-47
193.0
195
48.7
Sro1294_g260160
Seminavis robusta
6.9e-31
138.3
326
28.8
tho402200
Thalassiosira oceanica
2.7e-27
126.3
98
64.3
tho269740
Thalassiosira oceanica
2.4e-23
113.2
102
51.0
tho421640
Thalassiosira oceanica
4.0e-23
112.5
140
45.0
tho235600
Thalassiosira oceanica
5.3e-23
112.1
319
30.4
CC00G119970
Cyclotella cryptica
4.5e-22
109.0
152
40.1
gene16553
Fragilariopsis cylindrus
3.2e-20
102.8
335
26.6
tho69720
Thalassiosira oceanica
1.6e-19
100.5
151
41.1
tho201080
Thalassiosira oceanica
3.3e-17
92.8
128
40.6
tps36400
Thalassiosira pseudonana
2.3e-10
70.1
81
50.6
Naga_100497g3
Nannochloropsis gaditana
3.0e-10
69.7
261
25.7
Naga_101693g1
Nannochloropsis gaditana
2.5e-09
66.6
261
25.3
tho643920
Thalassiosira oceanica
5.7e-09
65.5
105
39.0
gene3576
Fragilariopsis cylindrus
7.4e-09
65.1
100
39.0
fso174580
Fistulifera solaris
6.9e-07
58.5
632
19.8
CC00G07980
Cyclotella cryptica
1.5e-06
57.4
190
28.4
fso181140
Fistulifera solaris
2.6e-06
56.6
662
19.8
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (0 genes)
Thalassiosira pseudonana (2 genes)
Thalassiosira oceanica (19 genes)
Pseudo-nitzschia multiseries (0 genes)
Fistulifera solaris (2 genes)
Fragilariopsis cylindrus (2 genes)
Cyclotella cryptica (14 genes)
Aureococcus anophagefferens (0 genes)
Ectocarpus siliculosus (0 genes)
Nannochloropsis gaditana (2 genes)
Homo sapiens (0 genes)
Drosophila melanogaster (0 genes)
Caenorhabditis elegans (0 genes)
Saccharomyces cerevisiae strain S288C (0 genes)
Schizosaccharomyces pombe (0 genes)
Arabidopsis thaliana (0 genes)
Cyanidioschyzon merolae (0 genes)
Chondrus crispus (0 genes)
Galdieria sulphuraria (0 genes)
Emiliania huxleyi (0 genes)
Paramecium tetraurelia (0 genes)
Seminavis robusta (2 genes)
Synedra acus (0 genes)
Physcomitrella patens (0 genes)
Chlamydomonas reinhardtii (0 genes)
Pseudo-nitzschia multistriata (0 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
Positions only
Genes only
Positions and Genes
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