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Interactive Phylogenetics Module
BLAST
Workbench
Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
CC00G86080
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
CC00G86080
Cyclotella cryptica
0.0e+00
1269.2
707
100.0
CC00G100720
Cyclotella cryptica
0.0e+00
1269.2
707
100.0
tho19880
Thalassiosira oceanica
0.0e+00
1148.3
707
90.8
tps171030
Thalassiosira pseudonana
0.0e+00
1138.3
673
92.4
ptri00320
Phaeodactylum tricornutum
0.0e+00
1136.3
707
87.1
fso58590
Fistulifera solaris
0.0e+00
1105.9
674
88.9
Sro1899_g304180
Seminavis robusta
0.0e+00
1101.7
707
85.7
ps00G36300
Pseudo-nitzschia multiseries
7.0e-312
1070.8
674
86.6
gene6600
Fragilariopsis cylindrus
1.0e-307
1057.0
710
83.5
Ec-10_000550
Ectocarpus siliculosus
1.0e-302
1040.4
708
80.5
AA0028G00840
Aureococcus anophagefferens
1.4e-299
1030.0
708
80.1
AA0005G01430
Aureococcus anophagefferens
3.4e-298
1025.4
709
80.4
Naga_100006g89
Nannochloropsis gaditana
8.3e-297
1020.8
713
80.1
fso145000
Fistulifera solaris
5.1e-278
958.4
591
88.0
AT5G56010
Arabidopsis thaliana
3.3e-277
955.7
708
73.7
AT5G56000
Arabidopsis thaliana
5.8e-274
944.9
708
73.3
AT5G56030
Arabidopsis thaliana
1.9e-272
939.9
738
71.0
Cre09.g386750
Chlamydomonas reinhardtii
1.2e-268
927.2
705
71.9
AT5G52640
Arabidopsis thaliana
1.6e-268
926.8
709
73.1
emh391720
Emiliania huxleyi
2.1e-268
926.4
710
72.7
emh233000
Emiliania huxleyi
2.1e-268
926.4
710
72.7
Pp3c9_6640
Physcomitrella patens
1.2e-266
920.6
708
73.9
Pp3c9_6690
Physcomitrella patens
1.5e-266
920.2
709
73.6
Pp3c15_4270
Physcomitrella patens
4.4e-266
918.7
707
73.4
Pp3c15_6622
Physcomitrella patens
2.2e-265
916.4
707
73.4
Pp3c15_6620
Physcomitrella patens
2.2e-265
916.4
707
73.4
Pp3c15_12515
Physcomitrella patens
1.4e-264
913.7
708
72.0
Pp3c15_12510
Physcomitrella patens
1.4e-264
913.7
708
72.0
emh533460
Emiliania huxleyi
3.9e-262
905.6
694
72.9
emh398220
Emiliania huxleyi
3.9e-262
905.6
694
72.9
gsu28050
Galdieria sulphuraria
4.6e-255
882.1
710
70.7
ENSG00000096384
Homo sapiens
1.9e-248
860.1
719
66.8
ccr72100
Chondrus crispus
4.2e-248
859.0
726
68.0
pte491270
Paramecium tetraurelia
2.3e-246
853.2
715
67.3
ENSG00000080824
Homo sapiens
6.7e-246
851.7
722
67.6
FBgn0001233
Drosophila melanogaster
1.8e-243
843.6
718
67.3
pte242920
Paramecium tetraurelia
1.1e-240
834.3
711
66.7
pte645840
Paramecium tetraurelia
1.6e-236
820.5
715
66.4
CM17G02240
Cyanidioschyzon merolae
7.9e-231
801.6
704
64.5
SPAC926.04c
Schizosaccharomyces pombe
7.7e-226
785.0
710
63.0
WBGene00000915
Caenorhabditis elegans
3.6e-223
776.2
710
62.3
YMR186W
Saccharomyces cerevisiae strain S288C
6.3e-220
765.4
708
62.7
YPL240C
Saccharomyces cerevisiae strain S288C
1.4e-219
764.2
713
62.6
pte627930
Paramecium tetraurelia
1.8e-219
763.8
635
67.7
pte534190
Paramecium tetraurelia
3.1e-187
656.8
597
64.5
AT4G24190
Arabidopsis thaliana
3.7e-172
606.7
721
51.5
ENSG00000166598
Homo sapiens
1.7e-169
597.8
684
52.0
Pp3c14_3360
Physcomitrella patens
2.8e-167
590.5
713
50.9
Ec-18_001040
Ectocarpus siliculosus
4.9e-164
579.7
686
51.2
Sro1994_g309990
Seminavis robusta
1.1e-163
578.6
362
82.6
Cre02.g080650
Chlamydomonas reinhardtii
1.3e-161
571.6
708
50.7
FBgn0039562
Drosophila melanogaster
2.3e-161
570.9
691
48.5
AA0006G05270
Aureococcus anophagefferens
3.4e-157
557.0
706
50.6
WBGene00011480
Caenorhabditis elegans
1.3e-156
555.1
713
47.4
Cre12.g514850
Chlamydomonas reinhardtii
1.3e-156
555.1
690
44.5
Naga_100015g31
Nannochloropsis gaditana
2.7e-154
547.4
720
47.5
Pp3c8_6510
Physcomitrella patens
4.3e-152
540.0
717
43.5
AT3G07770
Arabidopsis thaliana
5.4e-147
523.1
682
45.7
fso21160
Fistulifera solaris
1.6e-146
521.5
675
42.1
Ec-12_001560
Ectocarpus siliculosus
2.7e-146
520.8
692
41.2
Pp3c19_15000
Physcomitrella patens
2.7e-146
520.8
683
42.6
fso35690
Fistulifera solaris
4.6e-146
520.0
698
41.8
sya00G82420
Synedra acus
7.8e-146
519.2
688
41.3
pte89400
Paramecium tetraurelia
1.3e-145
518.5
700
45.6
ptri02140
Phaeodactylum tricornutum
6.6e-145
516.2
685
41.8
Naga_100036g29
Nannochloropsis gaditana
1.1e-144
515.4
700
41.0
Pp3c12_22440
Physcomitrella patens
1.9e-144
514.6
720
43.8
Sro812_g206010
Seminavis robusta
2.1e-143
511.1
701
43.1
Pp3c4_810
Physcomitrella patens
1.8e-142
508.1
710
43.7
PSNMU-V1.4_AUG-EV-PASAV3_0018670
Pseudo-nitzschia multistriata
3.1e-142
507.3
693
42.6
ps00G189530
Pseudo-nitzschia multiseries
4.0e-142
506.9
676
41.9
gsu38710
Galdieria sulphuraria
1.5e-141
505.0
696
42.2
emh577310
Emiliania huxleyi
1.7e-140
501.5
660
42.9
AT2G04030
Arabidopsis thaliana
4.9e-140
500.0
701
42.4
tps116240
Thalassiosira pseudonana
5.4e-139
496.5
692
40.3
gene18768
Fragilariopsis cylindrus
1.6e-138
495.0
676
42.0
tho36720
Thalassiosira oceanica
2.1e-138
494.6
698
40.1
pte22270
Paramecium tetraurelia
6.6e-137
489.6
763
42.2
CC00G144600
Cyclotella cryptica
1.9e-136
488.0
717
39.7
pte108370
Paramecium tetraurelia
3.3e-136
487.3
698
45.1
CM01G00610
Cyanidioschyzon merolae
5.6e-136
486.5
695
40.7
gsu95730
Galdieria sulphuraria
1.3e-135
485.3
693
41.6
ccr104800
Chondrus crispus
6.9e-134
479.6
739
38.7
AA0054G00180
Aureococcus anophagefferens
7.6e-133
476.1
684
42.1
CC00G165280
Cyclotella cryptica
3.8e-132
473.8
725
44.0
pte320350
Paramecium tetraurelia
1.8e-129
464.9
762
41.3
pte23150
Paramecium tetraurelia
3.9e-129
463.8
677
43.1
sya00G73920
Synedra acus
3.9e-129
463.8
742
42.9
tps154830
Thalassiosira pseudonana
3.7e-127
457.2
705
44.0
gene7034
Fragilariopsis cylindrus
9.0e-126
452.6
758
42.0
ps00G49440
Pseudo-nitzschia multiseries
1.7e-124
448.4
742
43.7
pte477620
Paramecium tetraurelia
3.8e-124
447.2
378
70.6
ccr170720
Chondrus crispus
3.2e-123
444.1
720
43.8
ptri11180
Phaeodactylum tricornutum
1.3e-121
438.7
747
42.3
fso151230
Fistulifera solaris
1.9e-120
434.9
736
37.9
emh659210
Emiliania huxleyi
2.5e-120
434.5
800
35.2
fso191780
Fistulifera solaris
7.4e-120
433.0
747
41.1
Sro323_g117320
Seminavis robusta
4.5e-117
423.7
753
40.1
Pp3s58_301
Physcomitrella patens
2.7e-106
387.9
672
36.8
Naga_100225g4
Nannochloropsis gaditana
1.3e-95
352.4
690
31.9
sya00G194800
Synedra acus
1.1e-94
349.4
677
33.2
ENSG00000126602
Homo sapiens
5.9e-93
343.6
677
32.3
ptri196190
Phaeodactylum tricornutum
2.2e-92
341.7
692
31.1
fso53330
Fistulifera solaris
2.9e-92
341.3
694
32.3
fso152770
Fistulifera solaris
3.2e-91
337.8
693
32.0
FBgn0026761
Drosophila melanogaster
1.6e-90
335.5
692
31.4
Ec-01_002460
Ectocarpus siliculosus
4.7e-90
334.0
697
31.4
pte454090
Paramecium tetraurelia
1.2e-88
329.3
685
30.8
pte18050
Paramecium tetraurelia
9.7e-88
326.2
479
46.8
sya00G260160
Synedra acus
6.3e-87
323.6
190
88.4
gene12594
Fragilariopsis cylindrus
1.8e-86
322.0
686
32.8
tps58430
Thalassiosira pseudonana
2.4e-86
321.6
716
30.6
sya00G122550
Synedra acus
3.8e-84
314.3
719
30.7
ps00G42200
Pseudo-nitzschia multiseries
5.0e-84
313.9
714
30.8
PSNMU-V1.4_AUG-EV-PASAV3_0063670
Pseudo-nitzschia multistriata
1.1e-83
312.8
723
31.3
Sro30_g019920
Seminavis robusta
1.9e-83
312.0
704
30.3
pte422390
Paramecium tetraurelia
2.5e-83
311.6
684
30.3
emh720100
Emiliania huxleyi
1.0e-81
306.2
682
31.2
pte477600
Paramecium tetraurelia
1.5e-80
302.4
253
63.6
pte13670
Paramecium tetraurelia
1.5e-75
285.8
399
50.1
WBGene00020110
Caenorhabditis elegans
1.8e-73
278.9
685
30.1
tho285500
Thalassiosira oceanica
1.8e-62
242.3
593
30.4
Sro1994_g309970
Seminavis robusta
9.2e-62
240.0
136
91.9
CC00G185890
Cyclotella cryptica
8.9e-57
223.4
609
28.2
gene10021
Fragilariopsis cylindrus
1.3e-52
209.5
216
52.3
Pp3s58_270
Physcomitrella patens
2.1e-45
185.7
325
36.9
AA0016G00890
Aureococcus anophagefferens
6.6e-36
154.1
382
28.5
emh494740
Emiliania huxleyi
6.6e-36
154.1
112
65.2
sya00G169230
Synedra acus
8.1e-34
147.1
353
30.0
ccr62760
Chondrus crispus
3.4e-32
141.7
224
38.8
ccr173960
Chondrus crispus
9.9e-32
140.2
224
38.8
ccr163640
Chondrus crispus
1.7e-31
139.4
224
38.8
tho405700
Thalassiosira oceanica
2.3e-28
129.0
177
42.4
pte13650
Paramecium tetraurelia
1.3e-26
123.2
206
36.4
Pp3c1_39580
Physcomitrella patens
1.4e-25
119.8
177
46.3
tps171110
Thalassiosira pseudonana
3.1e-25
118.6
95
74.7
tho293100
Thalassiosira oceanica
6.4e-23
110.9
61
93.4
CC00G185880
Cyclotella cryptica
1.1e-19
100.1
110
44.5
AA0138G00030
Aureococcus anophagefferens
2.5e-19
99.0
101
49.5
ccr102780
Chondrus crispus
7.6e-16
87.4
132
36.4
ccr169820
Chondrus crispus
1.7e-15
86.3
125
44.0
Sro1994_g309980
Seminavis robusta
3.3e-11
72.0
36
91.7
Pp3c9_20160
Physcomitrella patens
7.4e-11
70.9
130
36.2
pte18030
Paramecium tetraurelia
2.1e-10
69.3
100
39.0
Pp3c2_6890
Physcomitrella patens
7.1e-06
54.3
83
37.3
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (4 genes)
Thalassiosira pseudonana (5 genes)
Thalassiosira oceanica (5 genes)
Pseudo-nitzschia multiseries (4 genes)
Fistulifera solaris (8 genes)
Fragilariopsis cylindrus (5 genes)
Cyclotella cryptica (6 genes)
Aureococcus anophagefferens (6 genes)
Ectocarpus siliculosus (4 genes)
Nannochloropsis gaditana (4 genes)
Homo sapiens (4 genes)
Drosophila melanogaster (3 genes)
Caenorhabditis elegans (3 genes)
Saccharomyces cerevisiae strain S288C (2 genes)
Schizosaccharomyces pombe (1 genes)
Arabidopsis thaliana (7 genes)
Cyanidioschyzon merolae (2 genes)
Chondrus crispus (8 genes)
Galdieria sulphuraria (3 genes)
Emiliania huxleyi (8 genes)
Paramecium tetraurelia (18 genes)
Seminavis robusta (7 genes)
Synedra acus (6 genes)
Physcomitrella patens (17 genes)
Chlamydomonas reinhardtii (3 genes)
Pseudo-nitzschia multistriata (2 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
Positions only
Genes only
Positions and Genes
No editing