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Interactive Phylogenetics Module
BLAST
Workbench
Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
CC00G83660
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
CC00G83660
Cyclotella cryptica
0.0e+00
1954.1
959
100.0
CC00G42100
Cyclotella cryptica
1.9e-195
684.5
335
100.0
tho29640
Thalassiosira oceanica
2.8e-146
521.2
1429
28.6
tho136120
Thalassiosira oceanica
4.2e-142
507.3
1387
28.6
CC00G56990
Cyclotella cryptica
3.1e-113
411.4
781
33.8
CC00G167390
Cyclotella cryptica
2.2e-74
282.3
868
24.7
CC00G158560
Cyclotella cryptica
3.1e-68
261.9
439
36.4
tho439140
Thalassiosira oceanica
4.4e-59
231.5
218
54.6
tho639080
Thalassiosira oceanica
8.3e-58
227.3
165
66.1
CC00G28580
Cyclotella cryptica
1.2e-56
223.4
216
51.9
CC00G152990
Cyclotella cryptica
5.4e-49
198.0
377
33.2
tho536720
Thalassiosira oceanica
6.6e-47
191.0
206
49.0
tho528080
Thalassiosira oceanica
1.1e-44
183.7
170
51.2
CC00G201620
Cyclotella cryptica
6.0e-40
167.9
369
30.9
CC00G82980
Cyclotella cryptica
1.0e-31
140.6
126
53.2
CC00G44880
Cyclotella cryptica
3.3e-30
135.6
139
46.0
CC00G57320
Cyclotella cryptica
4.5e-27
125.2
101
53.5
CC00G163180
Cyclotella cryptica
2.3e-23
112.8
349
29.2
tho493300
Thalassiosira oceanica
2.1e-21
106.3
297
27.9
CC00G64030
Cyclotella cryptica
3.2e-17
92.4
139
37.4
CC00G46140
Cyclotella cryptica
1.8e-15
86.7
175
35.4
CC00G02340
Cyclotella cryptica
9.0e-12
74.3
162
29.6
CC00G82990
Cyclotella cryptica
1.7e-10
70.1
98
39.8
CC00G167380
Cyclotella cryptica
1.0e-07
60.8
96
36.5
CC00G67390
Cyclotella cryptica
1.1e-06
57.4
31
77.4
CC00G52170
Cyclotella cryptica
3.3e-06
55.8
87
32.2
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (0 genes)
Thalassiosira pseudonana (0 genes)
Thalassiosira oceanica (7 genes)
Pseudo-nitzschia multiseries (0 genes)
Fistulifera solaris (0 genes)
Fragilariopsis cylindrus (0 genes)
Cyclotella cryptica (19 genes)
Aureococcus anophagefferens (0 genes)
Ectocarpus siliculosus (0 genes)
Nannochloropsis gaditana (0 genes)
Homo sapiens (0 genes)
Drosophila melanogaster (0 genes)
Caenorhabditis elegans (0 genes)
Saccharomyces cerevisiae strain S288C (0 genes)
Schizosaccharomyces pombe (0 genes)
Arabidopsis thaliana (0 genes)
Cyanidioschyzon merolae (0 genes)
Chondrus crispus (0 genes)
Galdieria sulphuraria (0 genes)
Emiliania huxleyi (0 genes)
Paramecium tetraurelia (0 genes)
Seminavis robusta (0 genes)
Synedra acus (0 genes)
Physcomitrella patens (0 genes)
Chlamydomonas reinhardtii (0 genes)
Pseudo-nitzschia multistriata (0 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
Positions only
Genes only
Positions and Genes
No editing