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Interactive Phylogenetics Module
BLAST
Workbench
Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
CC00G78430
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
CC00G78430
Cyclotella cryptica
0.0e+00
1248.4
606
100.0
tps220550
Thalassiosira pseudonana
3.4e-283
975.3
531
88.3
tho310420
Thalassiosira oceanica
1.3e-261
903.7
489
85.7
Sro27_g018090
Seminavis robusta
6.9e-260
897.9
607
71.0
sya00G108180
Synedra acus
1.4e-252
873.6
598
69.2
fso180700
Fistulifera solaris
1.5e-249
863.6
602
70.1
fso185290
Fistulifera solaris
9.4e-249
860.9
602
69.9
ptri19750
Phaeodactylum tricornutum
5.7e-246
851.7
612
68.3
gene3183
Fragilariopsis cylindrus
3.5e-235
815.8
491
77.0
ps00G142430
Pseudo-nitzschia multiseries
4.4e-230
798.9
480
76.9
Naga_100050g6
Nannochloropsis gaditana
1.5e-206
720.7
611
59.4
gene20932
Fragilariopsis cylindrus
2.1e-203
710.3
426
76.8
Ec-08_005570
Ectocarpus siliculosus
2.7e-203
709.9
621
59.4
AA0034G00850
Aureococcus anophagefferens
2.5e-185
650.2
502
62.0
Pp3c2_3850
Physcomitrella patens
9.9e-174
611.7
537
57.2
AT3G62120
Arabidopsis thaliana
2.5e-169
597.0
506
56.5
ccr86180
Chondrus crispus
6.5e-165
582.4
515
54.6
Cre10.g429100
Chlamydomonas reinhardtii
2.1e-163
577.4
506
54.9
SPBC19C7.06
Schizosaccharomyces pombe
1.3e-160
568.2
618
49.4
ENSG00000136628
Homo sapiens
4.8e-160
566.2
516
56.0
pte782050
Paramecium tetraurelia
6.9e-159
562.4
497
54.3
WBGene00004189
Caenorhabditis elegans
1.2e-158
561.6
509
53.8
pte621940
Paramecium tetraurelia
1.5e-158
561.2
497
54.3
pte720140
Paramecium tetraurelia
1.7e-157
557.8
497
54.9
pte785740
Paramecium tetraurelia
3.8e-157
556.6
497
53.9
CM19G00240
Cyanidioschyzon merolae
1.4e-156
554.7
578
49.7
YHR020W
Saccharomyces cerevisiae strain S288C
3.2e-156
553.5
504
54.2
FBgn0005674
Drosophila melanogaster
2.5e-153
543.9
516
54.3
gsu90040
Galdieria sulphuraria
5.9e-150
532.7
527
52.6
ps00G181630
Pseudo-nitzschia multiseries
1.2e-126
455.3
498
47.0
AT5G52520
Arabidopsis thaliana
1.8e-111
404.8
504
41.1
Pp3c21_580
Physcomitrella patens
4.1e-111
403.7
607
39.2
Cre09.g406200
Chlamydomonas reinhardtii
4.7e-107
390.2
502
40.6
gsu68560
Galdieria sulphuraria
1.8e-106
388.3
518
39.4
tps99010
Thalassiosira pseudonana
4.4e-105
383.6
543
40.0
Naga_100042g42
Nannochloropsis gaditana
1.7e-104
381.7
523
39.8
AA0001G05430
Aureococcus anophagefferens
2.9e-104
380.9
515
39.0
tho229780
Thalassiosira oceanica
6.4e-104
379.8
527
39.5
fso42340
Fistulifera solaris
1.9e-103
378.3
528
39.8
PSNMU-V1.4_AUG-EV-PASAV3_0083450
Pseudo-nitzschia multistriata
7.0e-103
376.3
521
39.3
fso20350
Fistulifera solaris
1.0e-101
372.5
528
39.2
CC00G91550
Cyclotella cryptica
1.3e-101
372.1
528
40.0
gene16475
Fragilariopsis cylindrus
2.3e-101
371.3
530
38.9
sya00G52470
Synedra acus
5.0e-101
370.2
520
39.0
PSNMU-V1.4_AUG-EV-PASAV3_0088140
Pseudo-nitzschia multistriata
1.1e-100
369.0
431
45.5
CM10G00990
Cyanidioschyzon merolae
2.1e-99
364.8
522
39.8
ptri230410
Phaeodactylum tricornutum
4.0e-98
360.5
529
37.8
Sro213_g088490
Seminavis robusta
4.0e-98
360.5
519
38.3
ccr148240
Chondrus crispus
2.6e-97
357.8
490
39.4
ps00G23270
Pseudo-nitzschia multiseries
5.2e-90
333.6
519
36.8
PSNMU-V1.4_AUG-EV-PASAV3_0054880
Pseudo-nitzschia multistriata
6.4e-88
326.6
224
67.4
sya00G22750
Synedra acus
3.9e-77
290.8
530
35.7
emh540450
Emiliania huxleyi
3.6e-67
257.7
538
29.7
AT5G10880
Arabidopsis thaliana
5.7e-36
154.1
240
37.5
emh608830
Emiliania huxleyi
8.8e-29
130.2
165
41.2
tho310440
Thalassiosira oceanica
1.2e-25
119.8
117
58.1
Pp3c14_20630
Physcomitrella patens
5.9e-09
64.3
392
21.7
Pp3c2_11130
Physcomitrella patens
3.2e-07
58.5
392
21.2
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (2 genes)
Thalassiosira pseudonana (2 genes)
Thalassiosira oceanica (3 genes)
Pseudo-nitzschia multiseries (3 genes)
Fistulifera solaris (4 genes)
Fragilariopsis cylindrus (3 genes)
Cyclotella cryptica (2 genes)
Aureococcus anophagefferens (2 genes)
Ectocarpus siliculosus (1 genes)
Nannochloropsis gaditana (2 genes)
Homo sapiens (1 genes)
Drosophila melanogaster (1 genes)
Caenorhabditis elegans (1 genes)
Saccharomyces cerevisiae strain S288C (1 genes)
Schizosaccharomyces pombe (1 genes)
Arabidopsis thaliana (3 genes)
Cyanidioschyzon merolae (2 genes)
Chondrus crispus (2 genes)
Galdieria sulphuraria (2 genes)
Emiliania huxleyi (2 genes)
Paramecium tetraurelia (4 genes)
Seminavis robusta (2 genes)
Synedra acus (3 genes)
Physcomitrella patens (4 genes)
Chlamydomonas reinhardtii (2 genes)
Pseudo-nitzschia multistriata (3 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
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Genes only
Positions and Genes
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