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Interactive Phylogenetics Module
BLAST
Workbench
Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
CC00G76150
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
CC00G76150
Cyclotella cryptica
5.6e-122
438.3
224
100.0
CC00G100660
Cyclotella cryptica
1.2e-79
297.7
175
86.9
CC00G06130
Cyclotella cryptica
1.6e-73
277.3
175
80.0
CC00G48350
Cyclotella cryptica
2.3e-67
256.9
175
73.7
tho16720
Thalassiosira oceanica
1.4e-56
221.1
211
56.9
tho83920
Thalassiosira oceanica
7.7e-55
215.3
211
55.0
tho105160
Thalassiosira oceanica
7.4e-50
198.7
175
57.1
tho197380
Thalassiosira oceanica
9.7e-50
198.4
175
57.1
tho131480
Thalassiosira oceanica
8.2e-49
195.3
176
60.2
tho20420
Thalassiosira oceanica
1.4e-48
194.5
176
60.8
tho94400
Thalassiosira oceanica
2.0e-47
190.7
180
58.9
CC00G152980
Cyclotella cryptica
1.0e-46
188.3
113
84.1
tho64380
Thalassiosira oceanica
3.8e-46
186.4
175
54.9
tho385140
Thalassiosira oceanica
2.0e-31
137.5
103
67.0
Sro1780_g078321
Seminavis robusta
7.7e-31
135.6
213
39.9
CC00G30360
Cyclotella cryptica
1.2e-28
128.3
216
37.5
fso06610
Fistulifera solaris
8.0e-28
125.6
215
39.5
fso11860
Fistulifera solaris
8.0e-28
125.6
215
39.5
CC00G35370
Cyclotella cryptica
1.0e-27
125.2
213
37.1
fso200830
Fistulifera solaris
1.8e-27
124.4
215
39.5
tho293920
Thalassiosira oceanica
2.4e-24
114.0
212
36.8
tho338540
Thalassiosira oceanica
2.4e-24
114.0
212
36.8
fso121990
Fistulifera solaris
1.6e-23
111.3
178
39.9
tho111660
Thalassiosira oceanica
4.5e-23
109.8
212
36.3
fso11910
Fistulifera solaris
5.9e-23
109.4
178
40.4
fso181140
Fistulifera solaris
5.0e-22
106.3
175
39.4
tho56660
Thalassiosira oceanica
5.0e-22
106.3
212
35.4
fso174580
Fistulifera solaris
6.6e-22
105.9
175
39.4
fso38500
Fistulifera solaris
6.1e-20
99.4
214
34.6
tho112820
Thalassiosira oceanica
3.0e-19
97.1
68
66.2
tho408880
Thalassiosira oceanica
5.7e-18
92.8
71
62.0
CC00G163140
Cyclotella cryptica
1.3e-17
91.7
135
40.0
Sro418_g138951
Seminavis robusta
4.9e-17
89.7
161
36.6
CC00G141300
Cyclotella cryptica
1.4e-16
88.2
101
44.6
CC00G170210
Cyclotella cryptica
2.4e-16
87.4
78
52.6
CC00G87410
Cyclotella cryptica
1.6e-12
74.7
215
28.8
tho94380
Thalassiosira oceanica
1.0e-11
72.0
220
30.9
tho284480
Thalassiosira oceanica
1.0e-11
72.0
63
60.3
sya00G35570
Synedra acus
3.1e-11
70.5
209
31.1
sya00G49730
Synedra acus
6.8e-11
69.3
104
39.4
CC00G161440
Cyclotella cryptica
8.9e-11
68.9
168
33.3
sya00G229840
Synedra acus
4.4e-10
66.6
209
31.1
fso63650
Fistulifera solaris
7.5e-10
65.9
177
29.4
CC00G63160
Cyclotella cryptica
9.8e-10
65.5
177
29.9
sya00G213800
Synedra acus
2.9e-09
63.9
167
31.7
CC00G89570
Cyclotella cryptica
3.7e-09
63.5
182
28.6
sya00G45490
Synedra acus
3.7e-09
63.5
218
29.4
sya00G236680
Synedra acus
3.7e-09
63.5
218
29.4
sya00G247220
Synedra acus
3.7e-09
63.5
218
29.4
tho99520
Thalassiosira oceanica
1.9e-08
61.2
212
28.8
CC00G35440
Cyclotella cryptica
3.2e-08
60.5
159
28.9
tho668740
Thalassiosira oceanica
4.1e-08
60.1
63
54.0
CC00G15910
Cyclotella cryptica
7.0e-08
59.3
137
29.9
sya00G198350
Synedra acus
7.0e-08
59.3
141
31.9
CC00G45280
Cyclotella cryptica
9.2e-08
58.9
134
27.6
tho502580
Thalassiosira oceanica
2.0e-07
57.8
85
40.0
sya00G215520
Synedra acus
3.5e-07
57.0
133
33.1
sya00G236010
Synedra acus
3.5e-07
57.0
184
27.2
CC00G170410
Cyclotella cryptica
4.6e-07
56.6
171
28.1
sya00G163860
Synedra acus
7.8e-07
55.8
127
33.9
CC00G123980
Cyclotella cryptica
1.3e-06
55.1
111
32.4
Ec-07_000280
Ectocarpus siliculosus
8.6e-06
52.4
172
26.7
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (0 genes)
Thalassiosira pseudonana (0 genes)
Thalassiosira oceanica (20 genes)
Pseudo-nitzschia multiseries (0 genes)
Fistulifera solaris (9 genes)
Fragilariopsis cylindrus (0 genes)
Cyclotella cryptica (19 genes)
Aureococcus anophagefferens (0 genes)
Ectocarpus siliculosus (1 genes)
Nannochloropsis gaditana (0 genes)
Homo sapiens (0 genes)
Drosophila melanogaster (0 genes)
Caenorhabditis elegans (0 genes)
Saccharomyces cerevisiae strain S288C (0 genes)
Schizosaccharomyces pombe (0 genes)
Arabidopsis thaliana (0 genes)
Cyanidioschyzon merolae (0 genes)
Chondrus crispus (0 genes)
Galdieria sulphuraria (0 genes)
Emiliania huxleyi (0 genes)
Paramecium tetraurelia (0 genes)
Seminavis robusta (2 genes)
Synedra acus (11 genes)
Physcomitrella patens (0 genes)
Chlamydomonas reinhardtii (0 genes)
Pseudo-nitzschia multistriata (0 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
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Genes only
Positions and Genes
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