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Interactive Phylogenetics Module
BLAST
Workbench
Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
CC00G74590
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
CC00G74590
Cyclotella cryptica
0.0e+00
2029.6
993
100.0
tps59500
Thalassiosira pseudonana
0.0e+00
1799.6
985
88.2
tho241180
Thalassiosira oceanica
0.0e+00
1710.3
970
83.5
Sro1081_g239040
Seminavis robusta
0.0e+00
1490.7
991
72.6
fso68450
Fistulifera solaris
0.0e+00
1469.9
989
72.2
fso65690
Fistulifera solaris
0.0e+00
1466.8
989
72.0
ptri212990
Phaeodactylum tricornutum
0.0e+00
1453.0
991
71.1
PSNMU-V1.4_AUG-EV-PASAV3_0066990
Pseudo-nitzschia multistriata
0.0e+00
1451.8
986
71.9
ps00G120650
Pseudo-nitzschia multiseries
0.0e+00
1451.4
989
71.9
sya00G171490
Synedra acus
0.0e+00
1415.6
978
70.3
gene20295
Fragilariopsis cylindrus
0.0e+00
1323.9
977
66.8
Ec-12_001710
Ectocarpus siliculosus
0.0e+00
1230.7
963
61.8
Naga_100007g121
Nannochloropsis gaditana
0.0e+00
1213.4
969
61.0
AT5G49030
Arabidopsis thaliana
6.6e-308
1058.1
989
55.4
Cre16.g689871
Chlamydomonas reinhardtii
7.8e-301
1034.6
995
54.4
AA0005G04190
Aureococcus anophagefferens
1.8e-297
1023.5
1012
53.5
ccr38100
Chondrus crispus
7.1e-294
1011.5
992
51.9
emh562340
Emiliania huxleyi
1.6e-293
1010.4
911
57.1
emh562000
Emiliania huxleyi
1.6e-290
1000.3
924
56.3
Pp3c17_5990
Physcomitrella patens
1.6e-290
1000.3
997
53.3
CM05G00470
Cyanidioschyzon merolae
7.3e-283
974.9
973
51.5
gsu37250
Galdieria sulphuraria
2.1e-266
920.2
967
48.1
Pp3s46_440
Physcomitrella patens
8.0e-229
795.4
984
43.7
ENSG00000067704
Homo sapiens
1.8e-201
704.5
988
40.4
SPCC18B5.08c
Schizosaccharomyces pombe
3.6e-181
637.1
949
38.4
YPL040C
Saccharomyces cerevisiae strain S288C
5.4e-177
623.2
964
37.1
FBgn0036569
Drosophila melanogaster
3.2e-153
544.3
778
37.8
WBGene00002153
Caenorhabditis elegans
1.2e-131
472.6
763
36.2
emh737410
Emiliania huxleyi
9.7e-126
453.0
1088
30.4
sya00G181490
Synedra acus
1.5e-118
429.1
648
38.7
AT4G10320
Arabidopsis thaliana
9.5e-89
330.1
856
29.0
tho254100
Thalassiosira oceanica
2.8e-88
328.6
833
28.8
ps00G03650
Pseudo-nitzschia multiseries
6.1e-88
327.4
838
28.4
YBL076C
Saccharomyces cerevisiae strain S288C
1.5e-86
322.8
861
28.7
Sro797_g203890
Seminavis robusta
3.4e-86
321.6
832
28.1
CC00G37100
Cyclotella cryptica
5.7e-86
320.9
822
28.6
tps07210
Thalassiosira pseudonana
9.8e-86
320.1
830
27.5
ENSG00000196305
Homo sapiens
3.7e-85
318.2
824
28.8
sya00G254320
Synedra acus
8.3e-85
317.0
861
26.4
CM20G02800
Cyanidioschyzon merolae
1.1e-84
316.6
839
28.0
Cre16.g651750
Chlamydomonas reinhardtii
1.1e-84
316.6
837
29.2
ptri50090
Phaeodactylum tricornutum
1.8e-84
315.8
833
27.6
ccr174940
Chondrus crispus
1.2e-83
313.2
857
29.6
FBgn0027086
Drosophila melanogaster
2.7e-83
312.0
830
28.9
Pp3c16_16950
Physcomitrella patens
3.5e-83
311.6
882
26.9
SPBC8D2.06
Schizosaccharomyces pombe
3.5e-83
311.6
882
28.1
pte532690
Paramecium tetraurelia
5.9e-83
310.8
832
28.2
Ec-06_008740
Ectocarpus siliculosus
1.0e-82
310.1
799
27.7
gene4331
Fragilariopsis cylindrus
1.0e-82
310.1
826
27.2
gene11203
Fragilariopsis cylindrus
3.0e-82
308.5
779
28.0
gsu56540
Galdieria sulphuraria
6.6e-82
307.4
827
28.5
gsu56560
Galdieria sulphuraria
6.6e-82
307.4
827
28.5
Naga_100031g22
Nannochloropsis gaditana
6.6e-82
307.4
844
28.6
emh527880
Emiliania huxleyi
1.5e-81
306.2
846
29.4
pte141810
Paramecium tetraurelia
2.5e-81
305.4
831
28.2
fso84280
Fistulifera solaris
9.5e-81
303.5
824
26.9
fso169920
Fistulifera solaris
1.2e-80
303.1
799
27.7
emh230200
Emiliania huxleyi
8.9e-79
297.0
744
29.7
sya00G111420
Synedra acus
2.2e-77
292.4
461
37.3
AA0063G00150
Aureococcus anophagefferens
3.7e-77
291.6
843
27.8
PSNMU-V1.4_AUG-EV-PASAV3_0028870
Pseudo-nitzschia multistriata
4.1e-76
288.1
772
28.2
WBGene00002152
Caenorhabditis elegans
1.6e-75
286.2
844
26.3
Pp3c12_13790
Physcomitrella patens
4.4e-70
268.1
905
25.5
fso162820
Fistulifera solaris
3.6e-64
248.4
954
24.0
sya00G260170
Synedra acus
1.4e-63
246.5
829
25.0
fso117450
Fistulifera solaris
4.0e-63
245.0
827
24.7
Cre07.g350500
Chlamydomonas reinhardtii
4.4e-62
241.5
813
25.8
sya00G176930
Synedra acus
2.2e-61
239.2
967
23.8
WBGene00006936
Caenorhabditis elegans
3.7e-61
238.4
997
24.9
sya00G16570
Synedra acus
1.4e-60
236.5
842
24.2
pte629670
Paramecium tetraurelia
7.1e-60
234.2
491
30.8
fso54790
Fistulifera solaris
9.2e-60
233.8
870
25.2
Ec-12_005070
Ectocarpus siliculosus
1.2e-59
233.4
813
24.1
gene8182
Fragilariopsis cylindrus
1.6e-59
233.0
827
24.9
tho02920
Thalassiosira oceanica
3.5e-59
231.9
971
24.9
Sro427_g140590
Seminavis robusta
4.6e-59
231.5
815
23.8
ptri91670
Phaeodactylum tricornutum
6.0e-59
231.1
842
24.0
ptri228310
Phaeodactylum tricornutum
6.0e-59
231.1
921
24.4
CC00G35080
Cyclotella cryptica
1.3e-58
229.9
844
24.6
PSNMU-V1.4_AUG-EV-PASAV3_0021780
Pseudo-nitzschia multistriata
1.3e-58
229.9
827
23.9
AT5G16715
Arabidopsis thaliana
2.3e-58
229.2
903
25.0
YGR094W
Saccharomyces cerevisiae strain S288C
1.1e-57
226.9
875
24.9
CM16G03470
Cyanidioschyzon merolae
2.5e-57
225.7
856
24.9
Ec-08_004480
Ectocarpus siliculosus
3.3e-57
225.3
880
25.3
ps00G171470
Pseudo-nitzschia multiseries
5.6e-57
224.6
877
23.6
emh628500
Emiliania huxleyi
7.3e-57
224.2
831
25.3
ps00G87410
Pseudo-nitzschia multiseries
7.3e-57
224.2
790
23.8
fso05990
Fistulifera solaris
1.6e-56
223.0
893
24.6
emh575830
Emiliania huxleyi
2.1e-56
222.6
831
25.3
AA0005G05900
Aureococcus anophagefferens
3.6e-56
221.9
871
25.0
gsu123710
Galdieria sulphuraria
3.6e-56
221.9
854
24.5
Sro408_g136830
Seminavis robusta
3.6e-56
221.9
985
23.2
tps72660
Thalassiosira pseudonana
1.4e-55
219.9
817
24.5
AT1G14610
Arabidopsis thaliana
3.1e-55
218.8
908
24.3
Sro1629_g287120
Seminavis robusta
3.1e-55
218.8
793
26.4
tho17940
Thalassiosira oceanica
3.1e-55
218.8
983
23.7
tps45010
Thalassiosira pseudonana
4.0e-55
218.4
976
23.2
pte111680
Paramecium tetraurelia
8.9e-55
217.2
880
24.3
Cre12.g537100
Chlamydomonas reinhardtii
1.9e-52
209.5
822
24.5
SPBC1709.02c
Schizosaccharomyces pombe
2.4e-52
209.1
930
22.7
Pp3c2_9830
Physcomitrella patens
9.3e-52
207.2
813
25.0
emh437240
Emiliania huxleyi
2.1e-51
206.1
289
38.4
ENSG00000230985
Homo sapiens
3.5e-51
205.3
807
24.4
ENSG00000234032
Homo sapiens
3.5e-51
205.3
807
24.4
ENSG00000206476
Homo sapiens
3.5e-51
205.3
807
24.4
ENSG00000137411
Homo sapiens
6.0e-51
204.5
807
24.4
ENSG00000236178
Homo sapiens
6.0e-51
204.5
807
24.4
ENSG00000223494
Homo sapiens
6.0e-51
204.5
807
24.4
CC00G87360
Cyclotella cryptica
3.0e-50
202.2
791
23.8
ENSG00000204394
Homo sapiens
9.6e-49
197.2
834
22.2
ENSG00000231116
Homo sapiens
9.6e-49
197.2
834
22.2
ENSG00000226589
Homo sapiens
9.6e-49
197.2
834
22.2
ENSG00000096171
Homo sapiens
9.6e-49
197.2
834
22.2
ENSG00000224264
Homo sapiens
9.6e-49
197.2
834
22.2
gsu24520
Galdieria sulphuraria
2.1e-48
196.1
903
22.7
ccr24120
Chondrus crispus
1.4e-47
193.4
805
24.0
ccr37660
Chondrus crispus
3.1e-47
192.2
652
25.2
gene17222
Fragilariopsis cylindrus
1.2e-46
190.3
957
22.6
WBGene00006935
Caenorhabditis elegans
5.8e-46
188.0
844
24.4
FBgn0027079
Drosophila melanogaster
9.9e-46
187.2
964
22.9
AA0023G00130
Aureococcus anophagefferens
7.1e-44
181.0
847
23.0
SPAC4A8.08c
Schizosaccharomyces pombe
8.1e-40
167.5
927
21.4
FBgn0035942
Drosophila melanogaster
2.4e-39
166.0
866
22.3
pte108800
Paramecium tetraurelia
3.4e-38
162.2
845
22.0
ps00G02610
Pseudo-nitzschia multiseries
7.6e-30
134.4
946
21.7
emh459420
Emiliania huxleyi
4.9e-29
131.7
865
20.0
PSNMU-V1.4_AUG-EV-PASAV3_0031170
Pseudo-nitzschia multistriata
6.5e-29
131.3
877
21.7
ptri70730
Phaeodactylum tricornutum
5.5e-28
128.3
862
21.8
fso131500
Fistulifera solaris
1.2e-27
127.1
876
21.6
fso10660
Fistulifera solaris
1.6e-27
126.7
726
24.4
gene17664
Fragilariopsis cylindrus
6.0e-27
124.8
873
22.3
Naga_100001g125
Nannochloropsis gaditana
1.0e-26
124.0
871
22.3
Sro497_g154690
Seminavis robusta
1.0e-26
124.0
869
22.3
sya00G264960
Synedra acus
3.0e-26
122.5
876
21.1
CC00G197630
Cyclotella cryptica
8.7e-26
120.9
840
21.4
sya00G65530
Synedra acus
1.5e-25
120.2
875
20.8
gsu07450
Galdieria sulphuraria
7.4e-25
117.9
474
23.0
tps109180
Thalassiosira pseudonana
8.2e-24
114.4
888
20.7
AA0012G01560
Aureococcus anophagefferens
1.4e-23
113.6
870
22.0
CM16G02060
Cyanidioschyzon merolae
1.4e-23
113.6
988
19.5
ENSG00000011376
Homo sapiens
5.9e-22
108.2
858
21.9
gsu15690
Galdieria sulphuraria
1.1e-20
104.0
892
20.5
SPAC4G8.09
Schizosaccharomyces pombe
9.3e-20
100.9
838
21.2
emh678930
Emiliania huxleyi
3.0e-18
95.9
677
21.7
pte629650
Paramecium tetraurelia
1.6e-16
90.1
267
25.8
tho57280
Thalassiosira oceanica
3.1e-15
85.9
818
19.8
pte699740
Paramecium tetraurelia
4.6e-11
72.0
365
24.1
FBgn0027085
Drosophila melanogaster
7.9e-11
71.2
145
26.2
emh427310
Emiliania huxleyi
2.3e-10
69.7
268
26.5
Cre16.g651650
Chlamydomonas reinhardtii
2.6e-09
66.2
84
35.7
FBgn0053123
Drosophila melanogaster
2.6e-09
66.2
395
21.5
ccr141040
Chondrus crispus
3.3e-09
65.9
287
21.6
Naga_100028g2
Nannochloropsis gaditana
9.7e-09
64.3
265
25.3
WBGene00003074
Caenorhabditis elegans
4.8e-08
62.0
179
23.5
emh339510
Emiliania huxleyi
2.4e-07
59.7
285
26.3
WBGene00003073
Caenorhabditis elegans
6.9e-07
58.2
84
35.7
CC00G119710
Cyclotella cryptica
2.0e-06
56.6
95
37.9
Ec-18_004570
Ectocarpus siliculosus
2.0e-06
56.6
206
24.8
AA0012G00350
Aureococcus anophagefferens
2.6e-06
56.2
117
34.2
tps09700
Thalassiosira pseudonana
2.6e-06
56.2
95
37.9
fso153940
Fistulifera solaris
3.4e-06
55.8
173
27.7
PSNMU-V1.4_AUG-EV-PASAV3_0027360
Pseudo-nitzschia multistriata
3.4e-06
55.8
302
24.5
ccr63000
Chondrus crispus
4.5e-06
55.5
100
28.0
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (5 genes)
Thalassiosira pseudonana (6 genes)
Thalassiosira oceanica (5 genes)
Pseudo-nitzschia multiseries (5 genes)
Fistulifera solaris (11 genes)
Fragilariopsis cylindrus (6 genes)
Cyclotella cryptica (6 genes)
Aureococcus anophagefferens (6 genes)
Ectocarpus siliculosus (5 genes)
Nannochloropsis gaditana (4 genes)
Homo sapiens (14 genes)
Drosophila melanogaster (6 genes)
Caenorhabditis elegans (6 genes)
Saccharomyces cerevisiae strain S288C (3 genes)
Schizosaccharomyces pombe (5 genes)
Arabidopsis thaliana (4 genes)
Cyanidioschyzon merolae (4 genes)
Chondrus crispus (6 genes)
Galdieria sulphuraria (7 genes)
Emiliania huxleyi (12 genes)
Paramecium tetraurelia (7 genes)
Seminavis robusta (6 genes)
Synedra acus (9 genes)
Physcomitrella patens (5 genes)
Chlamydomonas reinhardtii (5 genes)
Pseudo-nitzschia multistriata (5 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
Positions only
Genes only
Positions and Genes
No editing