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Interactive Phylogenetics Module
BLAST
Workbench
Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
CC00G63160
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
CC00G63160
Cyclotella cryptica
9.7e-147
520.8
254
100.0
CC00G00700
Cyclotella cryptica
1.7e-130
466.8
254
91.3
CC00G120870
Cyclotella cryptica
1.7e-130
466.8
254
91.3
CC00G35440
Cyclotella cryptica
2.6e-128
459.5
254
90.9
CC00G45280
Cyclotella cryptica
3.4e-107
389.4
213
91.1
CC00G89570
Cyclotella cryptica
1.0e-100
367.9
207
87.0
CC00G101490
Cyclotella cryptica
1.3e-95
350.9
242
74.4
CC00G161440
Cyclotella cryptica
6.6e-95
348.6
254
68.1
CC00G166190
Cyclotella cryptica
6.4e-90
332.0
255
69.8
CC00G17610
Cyclotella cryptica
3.0e-87
323.2
186
86.6
tho158140
Thalassiosira oceanica
1.3e-79
297.7
257
58.4
CC00G37390
Cyclotella cryptica
5.6e-78
292.4
213
73.2
tho86000
Thalassiosira oceanica
1.2e-75
284.6
254
58.7
CC00G149300
Cyclotella cryptica
4.6e-72
272.7
238
58.4
CC00G170410
Cyclotella cryptica
6.0e-64
245.7
129
92.2
CC00G15910
Cyclotella cryptica
6.6e-63
242.3
132
90.2
CC00G87410
Cyclotella cryptica
7.9e-56
218.8
177
61.6
fso63650
Fistulifera solaris
7.4e-54
212.2
255
41.6
sya00G266280
Synedra acus
9.6e-54
211.8
256
44.9
CC00G160950
Cyclotella cryptica
1.7e-50
201.1
108
92.6
tho89820
Thalassiosira oceanica
2.7e-48
193.7
181
55.2
CC00G132530
Cyclotella cryptica
3.5e-48
193.4
119
79.8
sya00G256280
Synedra acus
2.2e-42
174.1
219
41.6
tho543480
Thalassiosira oceanica
2.2e-42
174.1
142
59.9
fso95610
Fistulifera solaris
8.2e-37
155.6
254
34.6
sya00G206120
Synedra acus
1.7e-34
147.9
134
53.7
tho94400
Thalassiosira oceanica
2.2e-34
147.5
245
35.9
sya00G229840
Synedra acus
9.4e-33
142.1
257
34.6
tho131480
Thalassiosira oceanica
2.1e-32
141.0
246
36.2
tho16720
Thalassiosira oceanica
1.0e-31
138.7
252
34.1
tho83920
Thalassiosira oceanica
1.8e-31
137.9
247
35.2
tho219020
Thalassiosira oceanica
3.9e-31
136.7
262
31.7
sya00G35570
Synedra acus
6.7e-31
136.0
255
32.2
tho94380
Thalassiosira oceanica
2.5e-30
134.0
276
30.4
CC00G06130
Cyclotella cryptica
4.3e-30
133.3
248
33.5
fso06610
Fistulifera solaris
5.7e-30
132.9
249
33.7
fso11860
Fistulifera solaris
5.7e-30
132.9
249
33.7
fso200830
Fistulifera solaris
5.7e-30
132.9
249
33.3
tho105160
Thalassiosira oceanica
5.7e-30
132.9
250
35.2
sya00G239850
Synedra acus
1.7e-29
131.3
177
37.9
tho123740
Thalassiosira oceanica
1.7e-29
131.3
261
30.7
CC00G100660
Cyclotella cryptica
2.2e-29
131.0
249
34.5
sya00G153830
Synedra acus
2.2e-29
131.0
196
37.8
tho64380
Thalassiosira oceanica
2.2e-29
131.0
250
34.4
tho197380
Thalassiosira oceanica
2.2e-29
131.0
250
34.8
Sro1780_g078321
Seminavis robusta
8.2e-29
129.0
269
31.2
tho20420
Thalassiosira oceanica
1.1e-28
128.6
247
33.6
fso11910
Fistulifera solaris
1.8e-28
127.9
249
30.5
sya00G170370
Synedra acus
1.8e-28
127.9
255
32.2
tho56660
Thalassiosira oceanica
3.1e-28
127.1
248
32.7
sya00G45490
Synedra acus
4.1e-28
126.7
254
31.5
sya00G236680
Synedra acus
4.1e-28
126.7
254
31.5
tho78180
Thalassiosira oceanica
5.3e-28
126.3
261
30.3
fso121990
Fistulifera solaris
2.0e-27
124.4
249
29.7
tho111660
Thalassiosira oceanica
2.6e-27
124.0
251
33.1
tho338540
Thalassiosira oceanica
1.7e-26
121.3
251
32.3
tho385140
Thalassiosira oceanica
1.7e-26
121.3
179
39.1
tho293920
Thalassiosira oceanica
5.0e-26
119.8
251
31.9
fso181140
Fistulifera solaris
1.9e-25
117.9
246
32.1
fso174580
Fistulifera solaris
4.2e-25
116.7
249
33.3
CC00G48350
Cyclotella cryptica
2.1e-24
114.4
250
28.8
sya00G213800
Synedra acus
4.7e-24
113.2
166
34.9
sya00G247220
Synedra acus
3.9e-23
110.2
195
33.8
fso38500
Fistulifera solaris
6.7e-23
109.4
252
25.8
CC00G30360
Cyclotella cryptica
2.0e-22
107.8
262
29.4
CC00G35370
Cyclotella cryptica
2.0e-22
107.8
248
31.0
fso76400
Fistulifera solaris
2.0e-22
107.8
266
29.7
CC00G141300
Cyclotella cryptica
3.3e-22
107.1
181
34.3
sya00G185170
Synedra acus
3.7e-21
103.6
106
50.0
ccr12540
Chondrus crispus
9.1e-20
99.0
188
34.6
ccr12560
Chondrus crispus
9.1e-20
99.0
188
34.6
ccr12580
Chondrus crispus
9.1e-20
99.0
188
34.6
sya00G215520
Synedra acus
1.5e-19
98.2
153
33.3
sya00G198350
Synedra acus
4.5e-19
96.7
173
32.9
Naga_101948g1
Nannochloropsis gaditana
5.9e-19
96.3
245
29.0
Ec-07_000280
Ectocarpus siliculosus
7.7e-19
95.9
252
28.2
ccr12600
Chondrus crispus
5.0e-18
93.2
156
37.8
ccr162020
Chondrus crispus
6.5e-18
92.8
152
38.2
ccr162000
Chondrus crispus
1.5e-17
91.7
182
33.5
Naga_100497g3
Nannochloropsis gaditana
1.5e-17
91.7
244
28.3
sya00G158100
Synedra acus
1.9e-17
91.3
131
34.4
sya00G70310
Synedra acus
2.5e-17
90.9
160
36.2
ccr162420
Chondrus crispus
4.2e-17
90.1
152
37.5
CC00G163140
Cyclotella cryptica
9.4e-17
89.0
261
27.6
sya00G08370
Synedra acus
1.2e-16
88.6
80
52.5
tho633240
Thalassiosira oceanica
3.6e-16
87.0
62
62.9
ccr12660
Chondrus crispus
6.1e-16
86.3
172
33.1
Cre03.g183950
Chlamydomonas reinhardtii
6.1e-16
86.3
270
25.2
Cre03.g186800
Chlamydomonas reinhardtii
8.0e-16
85.9
270
25.2
Cre16.g673450
Chlamydomonas reinhardtii
1.4e-15
85.1
270
24.8
AT4G23160
Arabidopsis thaliana
2.3e-15
84.3
250
26.4
Cre01.g045850
Chlamydomonas reinhardtii
3.9e-15
83.6
270
25.2
ptri214430
Phaeodactylum tricornutum
3.3e-14
80.5
266
28.6
CC00G170210
Cyclotella cryptica
5.7e-14
79.7
147
32.7
tho89800
Thalassiosira oceanica
9.7e-14
79.0
53
67.9
sya00G163860
Synedra acus
2.8e-13
77.4
127
35.4
tho99520
Thalassiosira oceanica
2.8e-13
77.4
244
29.1
Pp3c19_10880
Physcomitrella patens
3.7e-13
77.0
250
26.0
Sro114_g056420
Seminavis robusta
1.1e-12
75.5
137
29.9
Naga_100533g2
Nannochloropsis gaditana
3.1e-12
73.9
123
33.3
Naga_100252g7
Nannochloropsis gaditana
4.1e-12
73.6
139
30.9
CC00G76150
Cyclotella cryptica
5.3e-12
73.2
177
29.9
sya00G49730
Synedra acus
7.0e-12
72.8
244
25.0
CC00G152980
Cyclotella cryptica
1.6e-11
71.6
184
25.0
Pp3c1_34910
Physcomitrella patens
7.7e-11
69.3
189
25.9
tho17060
Thalassiosira oceanica
1.0e-10
68.9
134
35.1
sya00G179360
Synedra acus
8.5e-10
65.9
117
30.8
Naga_101449g1
Nannochloropsis gaditana
2.5e-09
64.3
96
37.5
Ec-21_000440
Ectocarpus siliculosus
7.2e-09
62.8
125
32.0
tho329240
Thalassiosira oceanica
7.2e-09
62.8
191
30.4
Ec-05_005370
Ectocarpus siliculosus
8.0e-08
59.3
133
27.8
Ec-12_008930
Ectocarpus siliculosus
8.0e-08
59.3
133
27.8
tho112820
Thalassiosira oceanica
1.0e-07
58.9
128
28.9
tho15640
Thalassiosira oceanica
2.6e-06
54.3
166
25.9
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (1 genes)
Thalassiosira pseudonana (0 genes)
Thalassiosira oceanica (28 genes)
Pseudo-nitzschia multiseries (0 genes)
Fistulifera solaris (11 genes)
Fragilariopsis cylindrus (0 genes)
Cyclotella cryptica (27 genes)
Aureococcus anophagefferens (0 genes)
Ectocarpus siliculosus (4 genes)
Nannochloropsis gaditana (5 genes)
Homo sapiens (0 genes)
Drosophila melanogaster (0 genes)
Caenorhabditis elegans (0 genes)
Saccharomyces cerevisiae strain S288C (0 genes)
Schizosaccharomyces pombe (0 genes)
Arabidopsis thaliana (1 genes)
Cyanidioschyzon merolae (0 genes)
Chondrus crispus (8 genes)
Galdieria sulphuraria (0 genes)
Emiliania huxleyi (0 genes)
Paramecium tetraurelia (0 genes)
Seminavis robusta (2 genes)
Synedra acus (21 genes)
Physcomitrella patens (2 genes)
Chlamydomonas reinhardtii (4 genes)
Pseudo-nitzschia multistriata (0 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
Positions only
Genes only
Positions and Genes
No editing