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Interactive Phylogenetics Module
BLAST
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Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
CC00G59600
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
CC00G59600
Cyclotella cryptica
0.0e+00
2317.7
1402
100.0
tps209070
Thalassiosira pseudonana
5.6e-199
696.8
1158
43.6
tho168000
Thalassiosira oceanica
1.7e-126
456.1
798
41.1
ptri177030
Phaeodactylum tricornutum
5.6e-50
201.8
634
28.7
fso64270
Fistulifera solaris
9.0e-40
167.9
673
29.0
ps00G49520
Pseudo-nitzschia multiseries
4.5e-39
165.6
689
26.9
PSNMU-V1.4_AUG-EV-PASAV3_0063900
Pseudo-nitzschia multistriata
1.3e-38
164.1
642
27.6
fso99610
Fistulifera solaris
1.9e-37
160.2
680
28.8
gene7030
Fragilariopsis cylindrus
4.6e-36
155.6
649
27.0
Sro448_g145220
Seminavis robusta
2.5e-29
133.3
845
23.9
sya00G42030
Synedra acus
9.4e-21
104.8
128
39.8
sya00G116210
Synedra acus
9.7e-10
68.2
222
26.1
sya00G245850
Synedra acus
1.3e-09
67.8
220
25.5
AT3G19510
Arabidopsis thaliana
3.1e-08
63.2
99
36.4
CC00G100990
Cyclotella cryptica
4.1e-08
62.8
87
39.1
Pp3c4_370
Physcomitrella patens
5.3e-08
62.4
94
34.0
Naga_100014g39
Nannochloropsis gaditana
7.7e-07
58.5
93
37.6
CC00G115680
Cyclotella cryptica
1.3e-06
57.8
41
53.7
Pp3c3_29290
Physcomitrella patens
1.7e-06
57.4
94
33.0
emh721260
Emiliania huxleyi
8.5e-06
55.1
65
40.0
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (1 genes)
Thalassiosira pseudonana (1 genes)
Thalassiosira oceanica (1 genes)
Pseudo-nitzschia multiseries (1 genes)
Fistulifera solaris (2 genes)
Fragilariopsis cylindrus (1 genes)
Cyclotella cryptica (3 genes)
Aureococcus anophagefferens (0 genes)
Ectocarpus siliculosus (0 genes)
Nannochloropsis gaditana (1 genes)
Homo sapiens (0 genes)
Drosophila melanogaster (0 genes)
Caenorhabditis elegans (0 genes)
Saccharomyces cerevisiae strain S288C (0 genes)
Schizosaccharomyces pombe (0 genes)
Arabidopsis thaliana (1 genes)
Cyanidioschyzon merolae (0 genes)
Chondrus crispus (0 genes)
Galdieria sulphuraria (0 genes)
Emiliania huxleyi (1 genes)
Paramecium tetraurelia (0 genes)
Seminavis robusta (1 genes)
Synedra acus (3 genes)
Physcomitrella patens (2 genes)
Chlamydomonas reinhardtii (0 genes)
Pseudo-nitzschia multistriata (1 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
Positions only
Genes only
Positions and Genes
No editing