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Interactive Phylogenetics Module
BLAST
Workbench
Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
CC00G59290
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
CC00G59290
Cyclotella cryptica
0.0e+00
1601.3
875
100.0
CC00G67300
Cyclotella cryptica
6.1e-140
500.0
860
41.0
CC00G92420
Cyclotella cryptica
8.3e-121
436.4
745
42.3
CC00G139370
Cyclotella cryptica
4.7e-116
420.6
833
40.1
CC00G193290
Cyclotella cryptica
1.7e-89
332.4
747
39.6
CC00G68530
Cyclotella cryptica
2.2e-81
305.4
825
32.0
CC00G05190
Cyclotella cryptica
1.6e-76
289.3
764
29.7
CC00G145190
Cyclotella cryptica
6.9e-67
257.3
611
30.6
CC00G176220
Cyclotella cryptica
2.1e-55
219.2
395
42.3
CC00G210680
Cyclotella cryptica
1.9e-40
169.5
445
31.9
CC00G210690
Cyclotella cryptica
2.6e-34
149.1
362
31.8
CC00G104520
Cyclotella cryptica
8.8e-30
134.0
189
48.7
CC00G42660
Cyclotella cryptica
2.0e-29
132.9
417
29.0
CC00G67130
Cyclotella cryptica
4.5e-26
121.7
197
44.7
CC00G153750
Cyclotella cryptica
9.7e-21
104.0
294
32.0
CC00G42860
Cyclotella cryptica
4.1e-11
72.0
58
58.6
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (0 genes)
Thalassiosira pseudonana (0 genes)
Thalassiosira oceanica (0 genes)
Pseudo-nitzschia multiseries (0 genes)
Fistulifera solaris (0 genes)
Fragilariopsis cylindrus (0 genes)
Cyclotella cryptica (16 genes)
Aureococcus anophagefferens (0 genes)
Ectocarpus siliculosus (0 genes)
Nannochloropsis gaditana (0 genes)
Homo sapiens (0 genes)
Drosophila melanogaster (0 genes)
Caenorhabditis elegans (0 genes)
Saccharomyces cerevisiae strain S288C (0 genes)
Schizosaccharomyces pombe (0 genes)
Arabidopsis thaliana (0 genes)
Cyanidioschyzon merolae (0 genes)
Chondrus crispus (0 genes)
Galdieria sulphuraria (0 genes)
Emiliania huxleyi (0 genes)
Paramecium tetraurelia (0 genes)
Seminavis robusta (0 genes)
Synedra acus (0 genes)
Physcomitrella patens (0 genes)
Chlamydomonas reinhardtii (0 genes)
Pseudo-nitzschia multistriata (0 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
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Positions and Genes
No editing