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Interactive Phylogenetics Module
BLAST
Workbench
Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
CC00G57060
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
CC00G57060
Cyclotella cryptica
1.9e-117
423.7
216
100.0
tps151450
Thalassiosira pseudonana
2.8e-84
313.5
173
87.3
tho203760
Thalassiosira oceanica
1.4e-83
311.2
215
70.7
PSNMU-V1.4_AUG-EV-PASAV3_0047680
Pseudo-nitzschia multistriata
1.5e-66
254.6
220
58.6
fso177620
Fistulifera solaris
2.9e-65
250.4
217
61.3
fso19370
Fistulifera solaris
1.1e-64
248.4
217
60.8
Sro352_g124240
Seminavis robusta
1.6e-63
244.6
168
69.6
ps00G50620
Pseudo-nitzschia multiseries
3.3e-61
236.9
220
57.3
ptri169140
Phaeodactylum tricornutum
5.9e-58
226.1
219
54.8
sya00G27100
Synedra acus
8.2e-52
205.7
156
60.3
sya00G260740
Synedra acus
3.1e-51
203.8
151
60.9
gene6953
Fragilariopsis cylindrus
1.6e-50
201.4
157
64.3
Naga_100084g19
Nannochloropsis gaditana
1.3e-44
181.8
162
53.1
Ec-12_002630
Ectocarpus siliculosus
3.7e-44
180.3
146
59.6
Cre06.g264500
Chlamydomonas reinhardtii
2.6e-37
157.5
173
47.4
Pp3c15_21890
Physcomitrella patens
4.4e-37
156.8
224
41.5
SPBC28E12.05
Schizosaccharomyces pombe
1.4e-35
151.8
173
40.5
AT3G56510
Arabidopsis thaliana
8.5e-33
142.5
201
38.3
YNR054C
Saccharomyces cerevisiae strain S288C
4.2e-32
140.2
201
38.8
AA0002G01160
Aureococcus anophagefferens
3.4e-29
130.6
138
45.7
ENSG00000146109
Homo sapiens
1.2e-26
122.1
149
44.3
gsu118120
Galdieria sulphuraria
2.3e-25
117.9
188
35.1
FBgn0052708
Drosophila melanogaster
1.1e-24
115.5
153
37.3
pte316860
Paramecium tetraurelia
6.8e-22
106.3
142
40.8
WBGene00019005
Caenorhabditis elegans
2.7e-18
94.4
203
30.5
CM08G01310
Cyanidioschyzon merolae
7.8e-18
92.8
199
29.1
emh538380
Emiliania huxleyi
7.8e-18
92.8
142
35.9
emh725080
Emiliania huxleyi
1.2e-15
85.5
130
36.9
FBgn0030524
Drosophila melanogaster
2.8e-15
84.3
109
36.7
FBgn0085521
Drosophila melanogaster
1.3e-12
75.5
109
34.9
FBgn0085693
Drosophila melanogaster
2.9e-12
74.3
109
34.9
FBgn0052706
Drosophila melanogaster
7.0e-11
69.7
147
30.6
FBgn0030085
Drosophila melanogaster
1.2e-10
68.9
146
30.8
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (1 genes)
Thalassiosira pseudonana (1 genes)
Thalassiosira oceanica (1 genes)
Pseudo-nitzschia multiseries (1 genes)
Fistulifera solaris (2 genes)
Fragilariopsis cylindrus (1 genes)
Cyclotella cryptica (1 genes)
Aureococcus anophagefferens (1 genes)
Ectocarpus siliculosus (1 genes)
Nannochloropsis gaditana (1 genes)
Homo sapiens (1 genes)
Drosophila melanogaster (6 genes)
Caenorhabditis elegans (1 genes)
Saccharomyces cerevisiae strain S288C (1 genes)
Schizosaccharomyces pombe (1 genes)
Arabidopsis thaliana (1 genes)
Cyanidioschyzon merolae (1 genes)
Chondrus crispus (0 genes)
Galdieria sulphuraria (1 genes)
Emiliania huxleyi (2 genes)
Paramecium tetraurelia (1 genes)
Seminavis robusta (1 genes)
Synedra acus (2 genes)
Physcomitrella patens (1 genes)
Chlamydomonas reinhardtii (1 genes)
Pseudo-nitzschia multistriata (1 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
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Genes only
Positions and Genes
No editing