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Interactive Phylogenetics Module
BLAST
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Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
CC00G56990
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
CC00G56990
Cyclotella cryptica
0.0e+00
2003.4
1012
100.0
CC00G167390
Cyclotella cryptica
1.4e-225
784.6
632
69.6
CC00G28580
Cyclotella cryptica
1.1e-188
662.1
470
76.4
CC00G83660
Cyclotella cryptica
3.0e-114
414.8
781
33.8
CC00G02340
Cyclotella cryptica
2.0e-102
375.6
214
89.3
CC00G46140
Cyclotella cryptica
1.8e-82
309.3
167
88.6
CC00G167380
Cyclotella cryptica
4.7e-67
258.1
163
87.7
tho29640
Thalassiosira oceanica
2.0e-62
242.7
904
25.7
CC00G42100
Cyclotella cryptica
8.5e-61
237.3
401
38.7
tho136120
Thalassiosira oceanica
2.7e-54
215.7
791
25.3
CC00G201620
Cyclotella cryptica
1.0e-50
203.8
434
32.7
CC00G152990
Cyclotella cryptica
8.0e-43
177.6
338
33.4
CC00G158560
Cyclotella cryptica
3.1e-39
165.6
451
29.3
CC00G64030
Cyclotella cryptica
5.4e-39
164.9
206
45.1
CC00G44880
Cyclotella cryptica
4.3e-20
102.1
173
36.4
CC00G163180
Cyclotella cryptica
8.1e-19
97.8
396
26.0
tho493300
Thalassiosira oceanica
3.7e-16
89.0
405
23.5
CC00G30590
Cyclotella cryptica
2.7e-14
82.8
102
38.2
CC00G52170
Cyclotella cryptica
6.6e-13
78.2
82
42.7
CC00G148700
Cyclotella cryptica
1.4e-07
60.5
112
40.2
CC00G78780
Cyclotella cryptica
1.9e-07
60.1
208
26.0
CC00G82990
Cyclotella cryptica
2.4e-07
59.7
125
33.6
CC00G176410
Cyclotella cryptica
4.6e-06
55.5
116
37.1
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (0 genes)
Thalassiosira pseudonana (0 genes)
Thalassiosira oceanica (3 genes)
Pseudo-nitzschia multiseries (0 genes)
Fistulifera solaris (0 genes)
Fragilariopsis cylindrus (0 genes)
Cyclotella cryptica (20 genes)
Aureococcus anophagefferens (0 genes)
Ectocarpus siliculosus (0 genes)
Nannochloropsis gaditana (0 genes)
Homo sapiens (0 genes)
Drosophila melanogaster (0 genes)
Caenorhabditis elegans (0 genes)
Saccharomyces cerevisiae strain S288C (0 genes)
Schizosaccharomyces pombe (0 genes)
Arabidopsis thaliana (0 genes)
Cyanidioschyzon merolae (0 genes)
Chondrus crispus (0 genes)
Galdieria sulphuraria (0 genes)
Emiliania huxleyi (0 genes)
Paramecium tetraurelia (0 genes)
Seminavis robusta (0 genes)
Synedra acus (0 genes)
Physcomitrella patens (0 genes)
Chlamydomonas reinhardtii (0 genes)
Pseudo-nitzschia multistriata (0 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
Positions only
Genes only
Positions and Genes
No editing