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Interactive Phylogenetics Module
BLAST
Workbench
Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
CC00G54030
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
CC00G54030
Cyclotella cryptica
0.0e+00
1335.9
738
100.0
tps175360
Thalassiosira pseudonana
1.6e-146
521.5
527
54.1
tho44420
Thalassiosira oceanica
1.1e-84
316.2
751
32.6
sya00G186260
Synedra acus
1.5e-70
269.2
751
28.1
fso55150
Fistulifera solaris
8.7e-63
243.4
764
27.7
fso05620
Fistulifera solaris
1.4e-57
226.1
729
27.6
gene11471
Fragilariopsis cylindrus
1.1e-54
216.5
790
27.6
PSNMU-V1.4_AUG-EV-PASAV3_0091330
Pseudo-nitzschia multistriata
1.9e-54
215.7
814
29.1
ptri139250
Phaeodactylum tricornutum
3.6e-53
211.5
781
28.0
ps00G127840
Pseudo-nitzschia multiseries
5.7e-38
161.0
791
26.2
Ec-21_000240
Ectocarpus siliculosus
3.2e-33
145.2
480
25.2
ENSG00000196419
Homo sapiens
5.1e-23
111.3
467
25.7
gsu80830
Galdieria sulphuraria
7.9e-16
87.4
485
22.3
Naga_100004g147
Nannochloropsis gaditana
4.4e-14
81.6
654
20.6
ccr50480
Chondrus crispus
1.1e-09
67.0
550
21.3
Sro764_g199000
Seminavis robusta
1.9e-09
66.2
311
24.1
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (1 genes)
Thalassiosira pseudonana (1 genes)
Thalassiosira oceanica (1 genes)
Pseudo-nitzschia multiseries (1 genes)
Fistulifera solaris (2 genes)
Fragilariopsis cylindrus (1 genes)
Cyclotella cryptica (1 genes)
Aureococcus anophagefferens (0 genes)
Ectocarpus siliculosus (1 genes)
Nannochloropsis gaditana (1 genes)
Homo sapiens (1 genes)
Drosophila melanogaster (0 genes)
Caenorhabditis elegans (0 genes)
Saccharomyces cerevisiae strain S288C (0 genes)
Schizosaccharomyces pombe (0 genes)
Arabidopsis thaliana (0 genes)
Cyanidioschyzon merolae (0 genes)
Chondrus crispus (1 genes)
Galdieria sulphuraria (1 genes)
Emiliania huxleyi (0 genes)
Paramecium tetraurelia (0 genes)
Seminavis robusta (1 genes)
Synedra acus (1 genes)
Physcomitrella patens (0 genes)
Chlamydomonas reinhardtii (0 genes)
Pseudo-nitzschia multistriata (1 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
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