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Interactive Phylogenetics Module
BLAST
Workbench
Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
CC00G52990
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
CC00G52990
Cyclotella cryptica
0.0e+00
1102.4
661
100.0
tho262720
Thalassiosira oceanica
3.6e-209
729.6
646
68.7
tps227470
Thalassiosira pseudonana
3.6e-193
676.4
647
56.9
PSNMU-V1.4_AUG-EV-PASAV3_0014030
Pseudo-nitzschia multistriata
1.3e-163
578.2
653
47.9
ptri93630
Phaeodactylum tricornutum
4.1e-157
556.6
641
47.1
fso57960
Fistulifera solaris
6.6e-155
549.3
648
47.5
Sro31_g020280
Seminavis robusta
1.6e-153
544.7
658
48.9
fso145590
Fistulifera solaris
2.1e-153
544.3
647
45.7
ps00G48160
Pseudo-nitzschia multiseries
1.1e-144
515.4
644
45.5
gene2285
Fragilariopsis cylindrus
5.3e-144
513.1
642
45.5
sya00G191280
Synedra acus
2.0e-143
511.1
653
44.9
Naga_100205g2
Nannochloropsis gaditana
1.4e-101
372.1
654
40.4
Pp3c2_2850
Physcomitrella patens
1.8e-83
312.0
646
31.9
ENSG00000168883
Homo sapiens
1.5e-82
308.9
654
31.8
AA0012G00760
Aureococcus anophagefferens
5.3e-80
300.4
621
32.9
AT4G22285
Arabidopsis thaliana
3.8e-78
294.3
643
30.8
AT4G22350
Arabidopsis thaliana
6.5e-78
293.5
643
30.8
FBgn0030969
Drosophila melanogaster
1.5e-74
282.3
647
30.4
emh755950
Emiliania huxleyi
8.3e-73
276.6
641
31.0
WBGene00017280
Caenorhabditis elegans
7.7e-71
270.0
649
29.7
gsu11360
Galdieria sulphuraria
8.3e-65
250.0
644
28.4
pte629970
Paramecium tetraurelia
1.4e-64
249.2
640
28.0
SPBC577.07
Schizosaccharomyces pombe
2.8e-60
235.0
641
25.4
AT4G22410
Arabidopsis thaliana
9.2e-56
219.9
485
30.5
ccr68160
Chondrus crispus
4.4e-50
201.1
643
25.7
Cre17.g721600
Chlamydomonas reinhardtii
9.9e-42
173.3
533
28.3
YFR005C
Saccharomyces cerevisiae strain S288C
1.3e-25
119.8
258
28.7
gsu02800
Galdieria sulphuraria
2.6e-18
95.5
256
28.1
ENSG00000172046
Homo sapiens
6.7e-06
54.3
142
29.6
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (1 genes)
Thalassiosira pseudonana (1 genes)
Thalassiosira oceanica (1 genes)
Pseudo-nitzschia multiseries (1 genes)
Fistulifera solaris (2 genes)
Fragilariopsis cylindrus (1 genes)
Cyclotella cryptica (1 genes)
Aureococcus anophagefferens (1 genes)
Ectocarpus siliculosus (0 genes)
Nannochloropsis gaditana (1 genes)
Homo sapiens (2 genes)
Drosophila melanogaster (1 genes)
Caenorhabditis elegans (1 genes)
Saccharomyces cerevisiae strain S288C (1 genes)
Schizosaccharomyces pombe (1 genes)
Arabidopsis thaliana (3 genes)
Cyanidioschyzon merolae (0 genes)
Chondrus crispus (1 genes)
Galdieria sulphuraria (2 genes)
Emiliania huxleyi (1 genes)
Paramecium tetraurelia (1 genes)
Seminavis robusta (1 genes)
Synedra acus (1 genes)
Physcomitrella patens (1 genes)
Chlamydomonas reinhardtii (1 genes)
Pseudo-nitzschia multistriata (1 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
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Genes only
Positions and Genes
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