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Interactive Phylogenetics Module
BLAST
Workbench
Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
CC00G45670
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
CC00G45670
Cyclotella cryptica
1.1e-303
1043.1
519
100.0
CC00G142060
Cyclotella cryptica
2.5e-258
892.5
445
99.3
tps122870
Thalassiosira pseudonana
1.6e-249
863.2
518
83.6
Sro1830_g300310
Seminavis robusta
4.5e-207
722.2
513
71.2
ps00G22320
Pseudo-nitzschia multiseries
7.6e-207
721.5
515
71.3
gene20466
Fragilariopsis cylindrus
1.0e-206
721.1
515
69.9
PSNMU-V1.4_AUG-EV-PASAV3_0016970
Pseudo-nitzschia multistriata
1.1e-205
717.6
509
70.7
ptri15010
Phaeodactylum tricornutum
1.8e-203
710.3
512
69.1
fso66600
Fistulifera solaris
3.7e-201
702.6
516
69.6
fso174830
Fistulifera solaris
1.4e-200
700.7
513
68.8
sya00G103910
Synedra acus
9.4e-197
688.0
507
68.2
Naga_100125g10
Nannochloropsis gaditana
3.7e-169
596.3
531
58.8
AA0058G00020
Aureococcus anophagefferens
5.7e-154
545.8
513
54.8
Pp3c13_4500
Physcomitrella patens
9.5e-149
528.5
515
52.8
ENSG00000177084
Homo sapiens
4.0e-147
523.1
511
53.0
SPBC25H2.13c
Schizosaccharomyces pombe
1.2e-146
521.5
422
60.7
Ec-10_005070
Ectocarpus siliculosus
1.3e-145
518.1
396
64.9
AT1G08260
Arabidopsis thaliana
9.2e-144
511.9
513
51.9
YNL262W
Saccharomyces cerevisiae strain S288C
9.2e-144
511.9
513
52.0
FBgn0264326
Drosophila melanogaster
5.0e-142
506.1
483
55.5
WBGene00009368
Caenorhabditis elegans
8.0e-140
498.8
398
61.6
AT2G27120
Arabidopsis thaliana
2.0e-138
494.2
515
50.9
ccr171860
Chondrus crispus
3.9e-126
453.4
410
54.9
CM17G00980
Cyanidioschyzon merolae
4.3e-125
449.9
406
53.4
pte125380
Paramecium tetraurelia
4.0e-123
443.4
401
49.9
gsu133780
Galdieria sulphuraria
5.8e-122
439.5
430
50.7
Cre03.g179961
Chlamydomonas reinhardtii
1.9e-109
397.9
377
52.5
tho197820
Thalassiosira oceanica
7.5e-53
209.9
199
58.3
emh452610
Emiliania huxleyi
8.3e-28
126.7
141
49.6
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (1 genes)
Thalassiosira pseudonana (1 genes)
Thalassiosira oceanica (1 genes)
Pseudo-nitzschia multiseries (1 genes)
Fistulifera solaris (2 genes)
Fragilariopsis cylindrus (1 genes)
Cyclotella cryptica (2 genes)
Aureococcus anophagefferens (1 genes)
Ectocarpus siliculosus (1 genes)
Nannochloropsis gaditana (1 genes)
Homo sapiens (1 genes)
Drosophila melanogaster (1 genes)
Caenorhabditis elegans (1 genes)
Saccharomyces cerevisiae strain S288C (1 genes)
Schizosaccharomyces pombe (1 genes)
Arabidopsis thaliana (2 genes)
Cyanidioschyzon merolae (1 genes)
Chondrus crispus (1 genes)
Galdieria sulphuraria (1 genes)
Emiliania huxleyi (1 genes)
Paramecium tetraurelia (1 genes)
Seminavis robusta (1 genes)
Synedra acus (1 genes)
Physcomitrella patens (1 genes)
Chlamydomonas reinhardtii (1 genes)
Pseudo-nitzschia multistriata (1 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
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Positions and Genes
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