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Interactive Phylogenetics Module
BLAST
Workbench
Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
CC00G40480
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
CC00G40480
Cyclotella cryptica
0.0e+00
1461.0
735
100.0
ptri137430
Phaeodactylum tricornutum
1.7e-183
644.4
630
53.7
fso67630
Fistulifera solaris
3.9e-180
633.3
660
50.3
fso22890
Fistulifera solaris
6.6e-180
632.5
641
50.9
Sro3092_g343570
Seminavis robusta
1.2e-168
595.1
642
49.4
PSNMU-V1.4_AUG-EV-PASAV3_0073670
Pseudo-nitzschia multistriata
1.5e-131
471.9
735
40.5
sya00G35590
Synedra acus
1.3e-106
389.0
405
50.6
tps172290
Thalassiosira pseudonana
4.2e-102
374.0
235
73.2
tho156800
Thalassiosira oceanica
8.8e-92
339.7
338
54.1
PSNMU-V1.4_AUG-EV-PASAV3_0102650
Pseudo-nitzschia multistriata
4.3e-70
267.7
239
56.5
Sro2_g001500
Seminavis robusta
1.6e-69
265.8
239
56.1
ps00G196060
Pseudo-nitzschia multiseries
8.1e-69
263.5
241
55.6
ps00G28060
Pseudo-nitzschia multiseries
1.3e-66
256.1
245
53.1
Naga_100056g6
Nannochloropsis gaditana
8.3e-66
253.4
217
53.5
gene17003
Fragilariopsis cylindrus
2.4e-65
251.9
246
52.0
gene4596
Fragilariopsis cylindrus
7.1e-65
250.4
280
47.1
ptri231610
Phaeodactylum tricornutum
2.3e-63
245.4
229
52.4
emh368420
Emiliania huxleyi
1.1e-62
243.0
240
49.2
sya00G173990
Synedra acus
2.5e-62
241.9
231
52.8
tps40540
Thalassiosira pseudonana
2.5e-62
241.9
205
58.5
CC00G110430
Cyclotella cryptica
3.6e-61
238.0
251
47.8
fso129680
Fistulifera solaris
4.7e-61
237.7
231
53.7
Ec-05_005280
Ectocarpus siliculosus
1.5e-59
232.6
188
54.8
fso140320
Fistulifera solaris
2.0e-59
232.3
231
53.2
WBGene00013241
Caenorhabditis elegans
4.9e-58
227.6
257
44.4
Pp3c14_15380
Physcomitrella patens
7.1e-57
223.8
223
48.4
AA0013G01280
Aureococcus anophagefferens
6.6e-55
217.2
208
52.4
AA0348G00020
Aureococcus anophagefferens
6.6e-55
217.2
208
52.4
AA0009G01290
Aureococcus anophagefferens
5.6e-54
214.2
216
49.1
ENSG00000076248
Homo sapiens
9.6e-54
213.4
218
47.7
AT3G18630
Arabidopsis thaliana
6.2e-53
210.7
284
43.7
Cre17.g746347
Chlamydomonas reinhardtii
1.8e-52
209.1
294
40.5
emh654970
Emiliania huxleyi
4.4e-51
204.5
210
46.7
pte381660
Paramecium tetraurelia
2.2e-50
202.2
191
52.4
gsu36830
Galdieria sulphuraria
2.9e-50
201.8
252
42.5
ccr67560
Chondrus crispus
2.1e-48
195.7
223
43.0
gene3636
Fragilariopsis cylindrus
1.0e-47
193.4
232
44.8
CM09G03000
Cyanidioschyzon merolae
2.3e-47
192.2
227
43.2
AA1658G00010
Aureococcus anophagefferens
1.4e-41
172.9
187
46.5
YML021C
Saccharomyces cerevisiae strain S288C
2.5e-38
162.2
206
44.7
Pp3c9_12680
Physcomitrella patens
1.7e-34
149.4
234
35.5
SPCC1183.06
Schizosaccharomyces pombe
1.4e-33
146.4
178
42.7
Pp3c15_19430
Physcomitrella patens
2.4e-33
145.6
199
37.7
Pp3c16_10730
Physcomitrella patens
4.2e-33
144.8
199
38.2
Pp3c16_12590
Physcomitrella patens
1.8e-31
139.4
199
36.7
Pp3c16_6060
Physcomitrella patens
1.9e-25
119.4
199
33.7
Pp3s67_100
Physcomitrella patens
5.5e-25
117.9
177
35.0
Pp3c1_10590
Physcomitrella patens
1.9e-22
109.4
196
33.2
Pp3c10_11550
Physcomitrella patens
9.7e-22
107.1
219
28.8
AA0013G00210
Aureococcus anophagefferens
1.3e-21
106.7
404
27.2
Pp3c11_15750
Physcomitrella patens
2.2e-21
105.9
219
28.8
Pp3c1_280
Physcomitrella patens
2.4e-20
102.4
113
40.7
emh678630
Emiliania huxleyi
6.9e-20
100.9
273
29.7
emh106340
Emiliania huxleyi
6.9e-20
100.9
273
29.7
Pp3c14_3990
Physcomitrella patens
1.4e-17
93.2
198
30.8
Pp3c14_4000
Physcomitrella patens
1.9e-17
92.8
258
28.3
AA0012G01970
Aureococcus anophagefferens
2.4e-12
75.9
181
32.6
sya00G175910
Synedra acus
5.5e-09
64.7
104
33.7
Pp3c4_24930
Physcomitrella patens
2.3e-07
59.3
102
29.4
Pp3c8_4630
Physcomitrella patens
3.0e-07
58.9
84
32.1
Pp3c9_17820
Physcomitrella patens
3.0e-07
58.9
102
29.4
AT1G52500
Arabidopsis thaliana
3.3e-06
55.5
189
26.5
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (2 genes)
Thalassiosira pseudonana (2 genes)
Thalassiosira oceanica (1 genes)
Pseudo-nitzschia multiseries (2 genes)
Fistulifera solaris (4 genes)
Fragilariopsis cylindrus (3 genes)
Cyclotella cryptica (2 genes)
Aureococcus anophagefferens (6 genes)
Ectocarpus siliculosus (1 genes)
Nannochloropsis gaditana (1 genes)
Homo sapiens (1 genes)
Drosophila melanogaster (0 genes)
Caenorhabditis elegans (1 genes)
Saccharomyces cerevisiae strain S288C (1 genes)
Schizosaccharomyces pombe (1 genes)
Arabidopsis thaliana (2 genes)
Cyanidioschyzon merolae (1 genes)
Chondrus crispus (1 genes)
Galdieria sulphuraria (1 genes)
Emiliania huxleyi (4 genes)
Paramecium tetraurelia (1 genes)
Seminavis robusta (2 genes)
Synedra acus (3 genes)
Physcomitrella patens (16 genes)
Chlamydomonas reinhardtii (1 genes)
Pseudo-nitzschia multistriata (2 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
Positions only
Genes only
Positions and Genes
No editing