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Interactive Phylogenetics Module
BLAST
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Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
CC00G36700
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
CC00G36700
Cyclotella cryptica
1.9e-139
496.5
241
100.0
CC00G170920
Cyclotella cryptica
2.0e-69
263.8
229
61.1
CC00G16360
Cyclotella cryptica
1.4e-65
251.1
145
84.1
CC00G20910
Cyclotella cryptica
1.8e-41
171.0
134
59.7
CC00G67460
Cyclotella cryptica
3.1e-38
160.2
92
84.8
CC00G109430
Cyclotella cryptica
2.5e-35
150.6
122
56.6
sya00G238580
Synedra acus
3.3e-35
150.2
276
35.1
sya00G62270
Synedra acus
2.8e-34
147.1
262
34.7
sya00G57360
Synedra acus
1.0e-33
145.2
262
35.1
sya00G246540
Synedra acus
9.8e-32
138.7
264
33.7
sya00G03650
Synedra acus
7.0e-30
132.5
237
34.6
sya00G59300
Synedra acus
6.0e-29
129.4
282
32.3
sya00G103790
Synedra acus
1.0e-28
128.6
145
46.2
sya00G93160
Synedra acus
1.5e-27
124.8
147
43.5
sya00G93260
Synedra acus
1.5e-27
124.8
147
43.5
sya00G212950
Synedra acus
1.9e-27
124.4
134
45.5
sya00G191580
Synedra acus
2.5e-27
124.0
146
45.2
sya00G245830
Synedra acus
4.3e-27
123.2
134
45.5
CC00G07460
Cyclotella cryptica
9.5e-27
122.1
142
53.5
sya00G207820
Synedra acus
9.5e-27
122.1
134
44.8
sya00G93190
Synedra acus
2.1e-26
120.9
147
42.9
sya00G102460
Synedra acus
6.8e-25
115.9
146
43.8
PSNMU-V1.4_AUG-EV-PASAV3_0011870
Pseudo-nitzschia multistriata
1.2e-24
115.2
278
29.9
PSNMU-V1.4_AUG-EV-PASAV3_0001900
Pseudo-nitzschia multistriata
9.8e-24
112.1
278
29.5
PSNMU-V1.4_AUG-EV-PASAV3_0006560
Pseudo-nitzschia multistriata
9.8e-24
112.1
278
29.1
sya00G79880
Synedra acus
8.3e-23
109.0
120
45.0
sya00G210010
Synedra acus
2.4e-22
107.5
132
41.7
sya00G186020
Synedra acus
6.0e-21
102.8
131
41.2
sya00G221970
Synedra acus
7.3e-19
95.9
109
45.0
sya00G59140
Synedra acus
9.5e-19
95.5
131
37.4
sya00G59780
Synedra acus
3.6e-18
93.6
237
30.0
sya00G92690
Synedra acus
1.5e-16
88.2
113
42.5
sya00G181920
Synedra acus
4.4e-16
86.7
108
42.6
sya00G165500
Synedra acus
1.7e-15
84.7
81
46.9
sya00G271160
Synedra acus
4.9e-15
83.2
118
39.0
sya00G65920
Synedra acus
5.4e-14
79.7
81
44.4
sya00G158680
Synedra acus
5.4e-14
79.7
80
45.0
sya00G209520
Synedra acus
7.1e-14
79.3
129
34.9
sya00G225580
Synedra acus
7.1e-14
79.3
103
41.7
sya00G49780
Synedra acus
1.6e-13
78.2
96
42.7
sya00G146680
Synedra acus
3.5e-13
77.0
234
28.2
sya00G225640
Synedra acus
4.6e-13
76.6
81
43.2
sya00G214840
Synedra acus
7.8e-13
75.9
80
43.8
sya00G151540
Synedra acus
1.0e-12
75.5
87
42.5
sya00G253490
Synedra acus
1.3e-12
75.1
80
42.5
sya00G180660
Synedra acus
2.1e-10
67.8
66
47.0
sya00G156700
Synedra acus
2.4e-09
64.3
63
44.4
fso163300
Fistulifera solaris
5.2e-09
63.2
153
30.7
sya00G05190
Synedra acus
6.8e-09
62.8
73
41.1
sya00G225180
Synedra acus
1.2e-08
62.0
88
35.2
ps00G26680
Pseudo-nitzschia multiseries
3.4e-08
60.5
241
26.6
sya00G122890
Synedra acus
5.8e-08
59.7
83
39.8
ptri214430
Phaeodactylum tricornutum
9.9e-08
58.9
147
25.9
sya00G145620
Synedra acus
1.7e-07
58.2
61
42.6
sya00G248190
Synedra acus
3.8e-07
57.0
72
36.1
sya00G161340
Synedra acus
4.9e-07
56.6
58
43.1
sya00G60910
Synedra acus
3.2e-06
53.9
50
46.0
sya00G177030
Synedra acus
3.2e-06
53.9
72
36.1
tho16720
Thalassiosira oceanica
7.1e-06
52.8
129
31.8
sya00G158100
Synedra acus
9.3e-06
52.4
130
27.7
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (1 genes)
Thalassiosira pseudonana (0 genes)
Thalassiosira oceanica (1 genes)
Pseudo-nitzschia multiseries (1 genes)
Fistulifera solaris (1 genes)
Fragilariopsis cylindrus (0 genes)
Cyclotella cryptica (7 genes)
Aureococcus anophagefferens (0 genes)
Ectocarpus siliculosus (0 genes)
Nannochloropsis gaditana (0 genes)
Homo sapiens (0 genes)
Drosophila melanogaster (0 genes)
Caenorhabditis elegans (0 genes)
Saccharomyces cerevisiae strain S288C (0 genes)
Schizosaccharomyces pombe (0 genes)
Arabidopsis thaliana (0 genes)
Cyanidioschyzon merolae (0 genes)
Chondrus crispus (0 genes)
Galdieria sulphuraria (0 genes)
Emiliania huxleyi (0 genes)
Paramecium tetraurelia (0 genes)
Seminavis robusta (0 genes)
Synedra acus (46 genes)
Physcomitrella patens (0 genes)
Chlamydomonas reinhardtii (0 genes)
Pseudo-nitzschia multistriata (3 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
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Genes only
Positions and Genes
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