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Interactive Phylogenetics Module
BLAST
Workbench
Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
CC00G33780
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
CC00G33780
Cyclotella cryptica
3.8e-97
355.5
181
100.0
CC00G33790
Cyclotella cryptica
3.8e-97
355.5
181
100.0
tps205230
Thalassiosira pseudonana
1.8e-62
240.4
168
69.6
tho150100
Thalassiosira oceanica
3.8e-44
179.5
187
48.1
CC00G47860
Cyclotella cryptica
4.3e-40
166.0
170
51.8
tho126780
Thalassiosira oceanica
7.1e-35
148.7
133
59.4
ccr56620
Chondrus crispus
2.4e-14
80.5
146
34.2
AT5G54860
Arabidopsis thaliana
3.0e-09
63.5
134
28.4
Pp3c19_4580
Physcomitrella patens
3.9e-09
63.2
157
26.8
AT5G10820
Arabidopsis thaliana
8.8e-09
62.0
132
31.1
Pp3c22_1880
Physcomitrella patens
8.8e-09
62.0
114
29.8
Pp3c1_14900
Physcomitrella patens
1.1e-08
61.6
115
33.0
Pp3c18_11000
Physcomitrella patens
1.5e-08
61.2
152
34.2
AA0011G00190
Aureococcus anophagefferens
2.6e-08
60.5
124
32.3
Pp3c25_9740
Physcomitrella patens
2.6e-08
60.5
141
31.9
AT2G32040
Arabidopsis thaliana
5.7e-08
59.3
128
29.7
pte309560
Paramecium tetraurelia
9.7e-08
58.5
157
31.2
Pp3c10_2680
Physcomitrella patens
2.8e-07
57.0
145
25.5
AT5G25050
Arabidopsis thaliana
4.8e-07
56.2
155
27.1
Naga_100076g12
Nannochloropsis gaditana
6.3e-07
55.8
137
27.7
AA0010G02330
Aureococcus anophagefferens
8.2e-07
55.5
74
36.5
emh565100
Emiliania huxleyi
1.1e-06
55.1
87
33.3
tps62480
Thalassiosira pseudonana
1.4e-06
54.7
113
31.9
AT1G79710
Arabidopsis thaliana
1.8e-06
54.3
125
30.4
CC00G177780
Cyclotella cryptica
1.8e-06
54.3
112
31.2
Pp3c21_8500
Physcomitrella patens
3.1e-06
53.5
117
34.2
pte555540
Paramecium tetraurelia
5.3e-06
52.8
152
28.3
Cre14.g615900
Chlamydomonas reinhardtii
6.9e-06
52.4
100
32.0
pte164090
Paramecium tetraurelia
9.1e-06
52.0
120
30.0
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (0 genes)
Thalassiosira pseudonana (2 genes)
Thalassiosira oceanica (2 genes)
Pseudo-nitzschia multiseries (0 genes)
Fistulifera solaris (0 genes)
Fragilariopsis cylindrus (0 genes)
Cyclotella cryptica (4 genes)
Aureococcus anophagefferens (2 genes)
Ectocarpus siliculosus (0 genes)
Nannochloropsis gaditana (1 genes)
Homo sapiens (0 genes)
Drosophila melanogaster (0 genes)
Caenorhabditis elegans (0 genes)
Saccharomyces cerevisiae strain S288C (0 genes)
Schizosaccharomyces pombe (0 genes)
Arabidopsis thaliana (5 genes)
Cyanidioschyzon merolae (0 genes)
Chondrus crispus (1 genes)
Galdieria sulphuraria (0 genes)
Emiliania huxleyi (1 genes)
Paramecium tetraurelia (3 genes)
Seminavis robusta (0 genes)
Synedra acus (0 genes)
Physcomitrella patens (7 genes)
Chlamydomonas reinhardtii (1 genes)
Pseudo-nitzschia multistriata (0 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
Positions only
Genes only
Positions and Genes
No editing