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Interactive Phylogenetics Module
BLAST
Workbench
Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
CC00G32390
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
CC00G32390
Cyclotella cryptica
0.0e+00
1627.1
812
100.0
tps190320
Thalassiosira pseudonana
1.4e-122
442.2
304
68.4
Sro1597_g284850
Seminavis robusta
1.1e-103
379.4
409
51.1
ptri222860
Phaeodactylum tricornutum
5.9e-97
357.1
418
50.0
sya00G65150
Synedra acus
4.0e-93
344.4
347
51.9
PSNMU-V1.4_AUG-EV-PASAV3_0092630
Pseudo-nitzschia multistriata
1.2e-92
342.8
422
47.4
fso123310
Fistulifera solaris
7.7e-89
330.1
417
47.0
gene16590
Fragilariopsis cylindrus
7.0e-82
307.0
395
45.3
Ec-20_000660
Ectocarpus siliculosus
9.2e-82
306.6
351
47.9
ps00G32980
Pseudo-nitzschia multiseries
6.8e-77
290.4
379
45.9
AA0008G00150
Aureococcus anophagefferens
3.2e-66
255.0
342
43.3
Naga_100311g1
Nannochloropsis gaditana
9.6e-55
216.9
215
52.1
CM12G02490
Cyanidioschyzon merolae
1.1e-50
203.4
395
35.7
fso56470
Fistulifera solaris
2.4e-50
202.2
309
37.2
ENSG00000114026
Homo sapiens
1.2e-49
199.9
319
37.3
Sro211_g087790
Seminavis robusta
1.2e-49
199.9
364
35.2
sya00G81860
Synedra acus
3.9e-48
194.9
221
46.6
gsu49240
Galdieria sulphuraria
5.1e-48
194.5
325
35.1
Pp3c15_7530
Physcomitrella patens
5.1e-48
194.5
387
35.4
AT1G21710
Arabidopsis thaliana
1.1e-47
193.4
349
35.8
gene1033
Fragilariopsis cylindrus
1.6e-41
172.9
199
42.7
ptri82150
Phaeodactylum tricornutum
7.9e-41
170.6
348
31.9
Cre01.g063632
Chlamydomonas reinhardtii
3.6e-38
161.8
437
30.2
PSNMU-V1.4_AUG-EV-PASAV3_0095140
Pseudo-nitzschia multistriata
2.4e-37
159.1
250
37.2
gene14467
Fragilariopsis cylindrus
4.0e-37
158.3
285
35.1
YML060W
Saccharomyces cerevisiae strain S288C
5.8e-36
154.5
376
30.9
emh279700
Emiliania huxleyi
4.2e-34
148.3
268
34.3
tho404680
Thalassiosira oceanica
1.3e-32
143.3
192
42.7
FBgn0027864
Drosophila melanogaster
3.3e-31
138.7
344
29.1
emh36380
Emiliania huxleyi
2.1e-30
136.0
152
44.1
gene1569
Fragilariopsis cylindrus
2.1e-30
136.0
265
34.3
emh650340
Emiliania huxleyi
6.0e-25
117.9
337
30.3
ps00G174580
Pseudo-nitzschia multiseries
3.7e-22
108.6
146
39.0
ccr148440
Chondrus crispus
3.1e-21
105.5
157
42.7
tho590480
Thalassiosira oceanica
8.7e-16
87.4
53
75.5
emh576690
Emiliania huxleyi
2.8e-14
82.4
254
26.8
emh114050
Emiliania huxleyi
2.8e-14
82.4
254
26.8
AA0002G01590
Aureococcus anophagefferens
1.5e-12
76.6
97
41.2
AA0010G02040
Aureococcus anophagefferens
1.9e-10
69.7
233
26.2
sya00G145480
Synedra acus
7.9e-09
64.3
171
29.2
PSNMU-V1.4_AUG-EV-PASAV3_0059680
Pseudo-nitzschia multistriata
1.0e-08
63.9
133
30.8
ps00G155220
Pseudo-nitzschia multiseries
4.8e-06
55.1
82
31.7
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (2 genes)
Thalassiosira pseudonana (1 genes)
Thalassiosira oceanica (2 genes)
Pseudo-nitzschia multiseries (3 genes)
Fistulifera solaris (2 genes)
Fragilariopsis cylindrus (4 genes)
Cyclotella cryptica (1 genes)
Aureococcus anophagefferens (3 genes)
Ectocarpus siliculosus (1 genes)
Nannochloropsis gaditana (1 genes)
Homo sapiens (1 genes)
Drosophila melanogaster (1 genes)
Caenorhabditis elegans (0 genes)
Saccharomyces cerevisiae strain S288C (1 genes)
Schizosaccharomyces pombe (0 genes)
Arabidopsis thaliana (1 genes)
Cyanidioschyzon merolae (1 genes)
Chondrus crispus (1 genes)
Galdieria sulphuraria (1 genes)
Emiliania huxleyi (5 genes)
Paramecium tetraurelia (0 genes)
Seminavis robusta (2 genes)
Synedra acus (3 genes)
Physcomitrella patens (1 genes)
Chlamydomonas reinhardtii (1 genes)
Pseudo-nitzschia multistriata (3 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
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Positions and Genes
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