Toggle navigation
Data
Overview
Download
Analyze
Gene families
Expansion_plot
Gene family finder
Synteny plot
Colinearity
Ks-graphs
Skyline plot
WGDotplot
Colinear region finder
Localization
Functional clusters
WGMapping
Other
Interactive Phylogenetics Module
BLAST
Workbench
Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
CC00G30270
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
CC00G30270
Cyclotella cryptica
5.0e-219
761.5
391
100.0
tps172830
Thalassiosira pseudonana
9.2e-96
352.1
191
88.5
tho219460
Thalassiosira oceanica
2.0e-82
307.8
332
52.4
ptri107800
Phaeodactylum tricornutum
1.2e-74
282.0
378
45.2
sya00G224110
Synedra acus
5.8e-74
279.6
275
52.0
Sro414_g138280
Seminavis robusta
8.3e-73
275.8
337
46.0
sya00G69580
Synedra acus
1.4e-72
275.0
352
45.7
fso100040
Fistulifera solaris
6.0e-63
243.0
260
53.8
fso154870
Fistulifera solaris
2.3e-62
241.1
261
54.0
PSNMU-V1.4_AUG-EV-PASAV3_0037520
Pseudo-nitzschia multistriata
6.6e-62
239.6
233
54.5
ps00G153650
Pseudo-nitzschia multiseries
7.3e-61
236.1
209
57.4
gene11648
Fragilariopsis cylindrus
9.9e-58
225.7
222
52.7
ENSG00000012061
Homo sapiens
3.2e-48
194.1
263
40.3
AT3G05210
Arabidopsis thaliana
1.6e-47
191.8
193
45.6
AA0016G00460
Aureococcus anophagefferens
1.5e-45
185.3
203
48.8
SPBC4F6.15c
Schizosaccharomyces pombe
3.1e-43
177.6
205
42.0
Cre03.g196651
Chlamydomonas reinhardtii
5.3e-43
176.8
196
48.0
Pp3c6_29610
Physcomitrella patens
1.5e-42
175.3
246
39.4
ccr134080
Chondrus crispus
1.9e-40
168.3
197
44.2
FBgn0028434
Drosophila melanogaster
3.0e-38
161.0
229
38.4
gsu52420
Galdieria sulphuraria
6.7e-38
159.8
190
42.1
CM07G00790
Cyanidioschyzon merolae
2.6e-26
121.3
233
34.3
emh773420
Emiliania huxleyi
4.6e-23
110.5
184
38.0
WBGene00008665
Caenorhabditis elegans
3.0e-22
107.8
190
32.6
Ec-20_000820
Ectocarpus siliculosus
6.7e-22
106.7
154
40.3
Naga_100554g5
Nannochloropsis gaditana
3.5e-10
67.8
71
43.7
YML095C
Saccharomyces cerevisiae strain S288C
5.9e-10
67.0
114
34.2
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (1 genes)
Thalassiosira pseudonana (1 genes)
Thalassiosira oceanica (1 genes)
Pseudo-nitzschia multiseries (1 genes)
Fistulifera solaris (2 genes)
Fragilariopsis cylindrus (1 genes)
Cyclotella cryptica (1 genes)
Aureococcus anophagefferens (1 genes)
Ectocarpus siliculosus (1 genes)
Nannochloropsis gaditana (1 genes)
Homo sapiens (1 genes)
Drosophila melanogaster (1 genes)
Caenorhabditis elegans (1 genes)
Saccharomyces cerevisiae strain S288C (1 genes)
Schizosaccharomyces pombe (1 genes)
Arabidopsis thaliana (1 genes)
Cyanidioschyzon merolae (1 genes)
Chondrus crispus (1 genes)
Galdieria sulphuraria (1 genes)
Emiliania huxleyi (1 genes)
Paramecium tetraurelia (0 genes)
Seminavis robusta (1 genes)
Synedra acus (2 genes)
Physcomitrella patens (1 genes)
Chlamydomonas reinhardtii (1 genes)
Pseudo-nitzschia multistriata (1 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
Positions only
Genes only
Positions and Genes
No editing