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Interactive Phylogenetics Module
BLAST
Workbench
Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
CC00G29540
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
CC00G29540
Cyclotella cryptica
2.6e-77
289.3
140
100.0
tps105440
Thalassiosira pseudonana
3.0e-65
249.2
168
74.4
Sro759_g198170
Seminavis robusta
5.8e-61
235.0
168
70.8
ptri100360
Phaeodactylum tricornutum
1.0e-60
234.2
168
69.0
tho336500
Thalassiosira oceanica
1.3e-60
233.8
168
70.8
fso57710
Fistulifera solaris
1.7e-60
233.4
168
70.2
sya00G144400
Synedra acus
5.5e-59
228.4
168
67.9
sya00G193640
Synedra acus
5.5e-59
228.4
168
67.9
PSNMU-V1.4_AUG-EV-PASAV3_0048190
Pseudo-nitzschia multistriata
9.3e-59
227.6
166
69.3
ps00G166590
Pseudo-nitzschia multiseries
2.1e-58
226.5
166
68.1
gene18392
Fragilariopsis cylindrus
5.7e-56
218.4
164
67.7
Ec-07_007090
Ectocarpus siliculosus
1.8e-49
196.8
165
60.6
FBgn0058045
Drosophila melanogaster
7.4e-40
164.9
160
53.8
fso145820
Fistulifera solaris
6.3e-39
161.8
127
66.1
Cre12.g546650
Chlamydomonas reinhardtii
1.4e-38
160.6
166
50.0
Pp3c1_30730
Physcomitrella patens
4.1e-38
159.1
158
50.0
Pp3c1_29770
Physcomitrella patens
4.1e-38
159.1
158
50.0
AT5G59300
Arabidopsis thaliana
5.3e-38
158.7
158
48.7
ENSG00000132388
Homo sapiens
7.0e-38
158.3
159
54.1
AT3G46460
Arabidopsis thaliana
9.1e-38
157.9
158
48.7
Pp3c2_6600
Physcomitrella patens
1.5e-37
157.1
158
50.0
FBgn0267383
Drosophila melanogaster
4.5e-37
155.6
159
51.6
WBGene00006704
Caenorhabditis elegans
1.7e-36
153.7
159
51.6
SPBC1105.09
Schizosaccharomyces pombe
2.9e-36
152.9
159
50.3
gsu102330
Galdieria sulphuraria
6.5e-36
151.8
159
50.3
ccr168900
Chondrus crispus
8.0e-34
144.8
159
49.7
AT3G55380
Arabidopsis thaliana
1.5e-32
140.6
192
41.1
AA0025G00520
Aureococcus anophagefferens
5.7e-32
138.7
129
55.8
CM19G05030
Cyanidioschyzon merolae
8.2e-31
134.8
160
44.4
ENSG00000184787
Homo sapiens
2.1e-26
120.2
161
41.0
SPBP16F5.04
Schizosaccharomyces pombe
2.1e-26
120.2
155
40.6
WBGene00006709
Caenorhabditis elegans
6.8e-25
115.2
163
37.4
FBgn0267384
Drosophila melanogaster
2.6e-24
113.2
155
38.7
ENSG00000107341
Homo sapiens
3.7e-23
109.4
157
38.9
pte276120
Paramecium tetraurelia
8.3e-23
108.2
145
42.1
pte272750
Paramecium tetraurelia
1.4e-22
107.5
155
40.6
YMR022W
Saccharomyces cerevisiae strain S288C
1.4e-22
107.5
163
37.4
pte77730
Paramecium tetraurelia
1.8e-22
107.1
145
41.4
ENSG00000099804
Homo sapiens
2.7e-21
103.2
140
39.3
FBgn0036516
Drosophila melanogaster
3.5e-21
102.8
143
38.5
YDR054C
Saccharomyces cerevisiae strain S288C
6.5e-20
98.6
164
35.4
WBGene00006702
Caenorhabditis elegans
2.7e-18
93.2
158
35.4
Pp3c7_12130
Physcomitrella patens
6.1e-18
92.0
107
42.1
ccr189180
Chondrus crispus
1.4e-14
80.9
155
31.6
pte599180
Paramecium tetraurelia
3.1e-14
79.7
133
33.8
Cre12.g515450
Chlamydomonas reinhardtii
2.7e-13
76.6
146
31.5
pte152590
Paramecium tetraurelia
7.7e-13
75.1
140
27.1
pte775270
Paramecium tetraurelia
7.7e-13
75.1
140
27.1
AA0014G00560
Aureococcus anophagefferens
1.3e-12
74.3
123
33.3
ccr101300
Chondrus crispus
1.7e-12
73.9
136
31.6
FBgn0004436
Drosophila melanogaster
1.7e-12
73.9
155
31.0
emh56920
Emiliania huxleyi
1.7e-12
73.9
148
29.1
ccr99300
Chondrus crispus
2.3e-12
73.6
144
31.9
gsu122210
Galdieria sulphuraria
2.3e-12
73.6
143
31.5
Pp3c12_9550
Physcomitrella patens
2.3e-12
73.6
155
30.3
Pp3c4_13490
Physcomitrella patens
2.3e-12
73.6
155
30.3
Pp3c4_13470
Physcomitrella patens
2.3e-12
73.6
155
30.3
WBGene00006701
Caenorhabditis elegans
3.8e-12
72.8
163
30.7
Ec-08_005320
Ectocarpus siliculosus
3.8e-12
72.8
155
29.7
AT2G02760
Arabidopsis thaliana
5.0e-12
72.4
155
29.7
AT1G14400
Arabidopsis thaliana
6.6e-12
72.0
155
29.7
AT5G62540
Arabidopsis thaliana
6.6e-12
72.0
163
28.8
ps00G19870
Pseudo-nitzschia multiseries
6.6e-12
72.0
147
30.6
YOR339C
Saccharomyces cerevisiae strain S288C
6.6e-12
72.0
140
31.4
ENSG00000077721
Homo sapiens
8.6e-12
71.6
160
28.8
tps10840
Thalassiosira pseudonana
8.6e-12
71.6
144
31.2
CM11G02520
Cyanidioschyzon merolae
1.1e-11
71.2
143
31.5
emh155330
Emiliania huxleyi
1.1e-11
71.2
155
28.4
gene192
Fragilariopsis cylindrus
1.1e-11
71.2
158
28.5
Cre06.g294850
Chlamydomonas reinhardtii
1.5e-11
70.9
158
29.1
CC00G184040
Cyclotella cryptica
1.5e-11
70.9
155
29.0
pte516620
Paramecium tetraurelia
1.5e-11
70.9
154
24.7
ptri154380
Phaeodactylum tricornutum
1.5e-11
70.9
155
29.0
Sro1123_g243660
Seminavis robusta
1.5e-11
70.9
155
29.0
sya00G207380
Synedra acus
1.5e-11
70.9
155
29.0
SPAC18B11.07c
Schizosaccharomyces pombe
2.5e-11
70.1
157
31.2
pte350730
Paramecium tetraurelia
3.3e-11
69.7
133
30.1
pte394880
Paramecium tetraurelia
3.3e-11
69.7
133
30.1
fso44350
Fistulifera solaris
5.5e-11
68.9
133
29.3
fso143100
Fistulifera solaris
5.5e-11
68.9
133
29.3
ENSG00000119048
Homo sapiens
5.5e-11
68.9
155
28.4
emh734410
Emiliania huxleyi
7.2e-11
68.6
141
27.7
gsu52440
Galdieria sulphuraria
1.6e-10
67.4
141
29.1
emh236790
Emiliania huxleyi
2.1e-10
67.0
134
30.6
pte174870
Paramecium tetraurelia
2.1e-10
67.0
145
29.7
pte676590
Paramecium tetraurelia
3.6e-10
66.2
141
24.8
Cre16.g693700
Chlamydomonas reinhardtii
6.1e-10
65.5
146
26.7
ccr158960
Chondrus crispus
8.0e-10
65.1
152
28.3
ccr168860
Chondrus crispus
8.0e-10
65.1
154
24.0
FBgn0011217
Drosophila melanogaster
8.0e-10
65.1
154
24.7
emh237190
Emiliania huxleyi
8.0e-10
65.1
157
25.5
ENSG00000109332
Homo sapiens
8.0e-10
65.1
154
24.7
SPBC119.02
Schizosaccharomyces pombe
8.0e-10
65.1
154
25.3
CM04G01520
Cyanidioschyzon merolae
1.4e-09
64.3
154
24.7
AT1G36340
Arabidopsis thaliana
1.8e-09
63.9
126
29.4
ENSG00000072401
Homo sapiens
1.8e-09
63.9
154
24.0
Naga_100276g2
Nannochloropsis gaditana
1.8e-09
63.9
138
30.4
WBGene00002344
Caenorhabditis elegans
2.3e-09
63.5
154
24.0
gsu12260
Galdieria sulphuraria
2.3e-09
63.5
157
23.6
ENSG00000078967
Homo sapiens
4.0e-09
62.8
154
24.0
Pp3c17_19310
Physcomitrella patens
4.0e-09
62.8
152
24.3
AT4G27960
Arabidopsis thaliana
5.2e-09
62.4
155
23.2
Naga_100019g40
Nannochloropsis gaditana
5.2e-09
62.4
119
29.4
Pp3c14_21480
Physcomitrella patens
5.2e-09
62.4
152
24.3
gene10688
Fragilariopsis cylindrus
6.8e-09
62.0
150
26.0
gsu34470
Galdieria sulphuraria
6.8e-09
62.0
146
28.8
gsu34490
Galdieria sulphuraria
6.8e-09
62.0
146
28.8
Pp3c14_24450
Physcomitrella patens
6.8e-09
62.0
152
24.3
ps00G26430
Pseudo-nitzschia multiseries
6.8e-09
62.0
150
26.0
sya00G189610
Synedra acus
6.8e-09
62.0
150
26.0
AT3G08690
Arabidopsis thaliana
8.9e-09
61.6
152
24.3
fso04130
Fistulifera solaris
8.9e-09
61.6
150
25.3
fso103140
Fistulifera solaris
8.9e-09
61.6
150
25.3
tps141460
Thalassiosira pseudonana
8.9e-09
61.6
150
26.0
AT2G16740
Arabidopsis thaliana
1.2e-08
61.2
157
23.6
WBGene00006708
Caenorhabditis elegans
1.2e-08
61.2
134
27.6
FBgn0031331
Drosophila melanogaster
1.2e-08
61.2
140
25.7
Sro194_g082980
Seminavis robusta
1.2e-08
61.2
114
28.9
AT5G53300
Arabidopsis thaliana
1.5e-08
60.8
152
23.7
Ec-15_004630
Ectocarpus siliculosus
1.5e-08
60.8
143
28.7
gsu95320
Galdieria sulphuraria
1.5e-08
60.8
137
27.0
ENSG00000182247
Homo sapiens
1.5e-08
60.8
154
25.3
Naga_100007g100
Nannochloropsis gaditana
1.5e-08
60.8
150
24.0
SPCC1259.15c
Schizosaccharomyces pombe
1.5e-08
60.8
146
26.7
Sro2183_g318050
Seminavis robusta
1.5e-08
60.8
150
25.3
CC00G77500
Cyclotella cryptica
2.0e-08
60.5
150
25.3
AT5G56150
Arabidopsis thaliana
2.6e-08
60.1
154
24.0
Ec-07_001940
Ectocarpus siliculosus
3.4e-08
59.7
129
27.9
ENSG00000170035
Homo sapiens
3.4e-08
59.7
154
25.3
ENSG00000170142
Homo sapiens
3.4e-08
59.7
154
24.7
AA0006G03980
Aureococcus anophagefferens
4.4e-08
59.3
156
24.4
emh314720
Emiliania huxleyi
4.4e-08
59.3
139
25.2
Pp3c24_130
Physcomitrella patens
4.4e-08
59.3
154
26.6
AA0025G00510
Aureococcus anophagefferens
5.7e-08
58.9
117
29.9
Cre06.g292800
Chlamydomonas reinhardtii
5.7e-08
58.9
154
25.3
Pp3c23_500
Physcomitrella patens
5.7e-08
58.9
154
26.6
YGL058W
Saccharomyces cerevisiae strain S288C
5.7e-08
58.9
120
29.2
tho58980
Thalassiosira oceanica
7.5e-08
58.5
147
25.9
AT5G41700
Arabidopsis thaliana
1.3e-07
57.8
152
23.0
FBgn0264848
Drosophila melanogaster
1.3e-07
57.8
112
30.4
FBgn0035455
Drosophila melanogaster
1.7e-07
57.4
154
22.7
Pp3c12_9600
Physcomitrella patens
2.2e-07
57.0
80
36.2
pte155300
Paramecium tetraurelia
2.2e-07
57.0
141
28.4
AT1G64230
Arabidopsis thaliana
2.8e-07
56.6
130
23.8
CC00G65730
Cyclotella cryptica
2.8e-07
56.6
120
28.3
emh363860
Emiliania huxleyi
2.8e-07
56.6
112
33.0
Pp3c6_12520
Physcomitrella patens
2.8e-07
56.6
118
28.8
emh534680
Emiliania huxleyi
3.7e-07
56.2
128
27.3
emh103110
Emiliania huxleyi
3.7e-07
56.2
128
27.3
pte372670
Paramecium tetraurelia
3.7e-07
56.2
118
28.8
tho176500
Thalassiosira oceanica
3.7e-07
56.2
122
27.9
gene16387
Fragilariopsis cylindrus
4.9e-07
55.8
123
26.0
Naga_100887g2
Nannochloropsis gaditana
4.9e-07
55.8
128
25.8
PSNMU-V1.4_AUG-EV-PASAV3_0097600
Pseudo-nitzschia multistriata
4.9e-07
55.8
120
27.5
Pp3c14_23460
Physcomitrella patens
4.9e-07
55.8
129
24.0
ps00G194480
Pseudo-nitzschia multiseries
4.9e-07
55.8
120
27.5
AT3G08700
Arabidopsis thaliana
6.3e-07
55.5
145
23.4
ccr144320
Chondrus crispus
6.3e-07
55.5
127
26.8
FBgn0015320
Drosophila melanogaster
6.3e-07
55.5
154
24.7
Ec-28_000490
Ectocarpus siliculosus
6.3e-07
55.5
117
28.2
Pp3c9_23630
Physcomitrella patens
6.3e-07
55.5
137
24.8
FBgn0030863
Drosophila melanogaster
1.1e-06
54.7
136
29.4
emh53700
Emiliania huxleyi
1.1e-06
54.7
118
31.4
fso71550
Fistulifera solaris
1.1e-06
54.7
124
27.4
pte201070
Paramecium tetraurelia
1.1e-06
54.7
144
22.9
sya00G261810
Synedra acus
1.1e-06
54.7
99
31.3
fso191160
Fistulifera solaris
1.4e-06
54.3
124
28.2
Pp3c8_1130
Physcomitrella patens
1.4e-06
54.3
129
23.3
ptri82770
Phaeodactylum tricornutum
1.4e-06
54.3
129
27.9
SPAC30D11.13
Schizosaccharomyces pombe
1.4e-06
54.3
131
25.2
Sro194_g083030
Seminavis robusta
1.4e-06
54.3
96
30.2
Cre13.g570300
Chlamydomonas reinhardtii
1.8e-06
53.9
146
26.0
CC00G141600
Cyclotella cryptica
1.8e-06
53.9
130
28.5
CM07G01360
Cyanidioschyzon merolae
2.4e-06
53.5
138
26.8
AT5G25760
Arabidopsis thaliana
3.2e-06
53.1
110
28.2
WBGene00006713
Caenorhabditis elegans
3.2e-06
53.1
154
23.4
pte102430
Paramecium tetraurelia
3.2e-06
53.1
125
28.0
sya00G106240
Synedra acus
3.2e-06
53.1
109
27.5
PSNMU-V1.4_AUG-EV-PASAV3_0013770
Pseudo-nitzschia multistriata
4.1e-06
52.8
109
27.5
pte551900
Paramecium tetraurelia
4.1e-06
52.8
139
23.7
pte723950
Paramecium tetraurelia
4.1e-06
52.8
135
25.9
tps168390
Thalassiosira pseudonana
4.1e-06
52.8
149
26.8
ccr64400
Chondrus crispus
5.4e-06
52.4
136
31.6
ENSG00000279392
Homo sapiens
5.4e-06
52.4
151
24.5
tps116500
Thalassiosira pseudonana
5.4e-06
52.4
120
26.7
ENSG00000185651
Homo sapiens
7.0e-06
52.0
130
26.2
ps00G71040
Pseudo-nitzschia multiseries
7.0e-06
52.0
130
26.9
Sro177_g077880
Seminavis robusta
7.0e-06
52.0
126
24.6
Cre01.g026600
Chlamydomonas reinhardtii
9.2e-06
51.6
134
24.6
ENSG00000103275
Homo sapiens
9.2e-06
51.6
109
27.5
pte522700
Paramecium tetraurelia
9.2e-06
51.6
144
25.0
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (3 genes)
Thalassiosira pseudonana (5 genes)
Thalassiosira oceanica (3 genes)
Pseudo-nitzschia multiseries (5 genes)
Fistulifera solaris (8 genes)
Fragilariopsis cylindrus (4 genes)
Cyclotella cryptica (5 genes)
Aureococcus anophagefferens (4 genes)
Ectocarpus siliculosus (5 genes)
Nannochloropsis gaditana (4 genes)
Homo sapiens (15 genes)
Drosophila melanogaster (11 genes)
Caenorhabditis elegans (7 genes)
Saccharomyces cerevisiae strain S288C (4 genes)
Schizosaccharomyces pombe (6 genes)
Arabidopsis thaliana (16 genes)
Cyanidioschyzon merolae (4 genes)
Chondrus crispus (8 genes)
Galdieria sulphuraria (7 genes)
Emiliania huxleyi (10 genes)
Paramecium tetraurelia (18 genes)
Seminavis robusta (6 genes)
Synedra acus (6 genes)
Physcomitrella patens (17 genes)
Chlamydomonas reinhardtii (7 genes)
Pseudo-nitzschia multistriata (3 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
Positions only
Genes only
Positions and Genes
No editing