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Interactive Phylogenetics Module
BLAST
Workbench
Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
CC00G29320
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
CC00G29320
Cyclotella cryptica
2.3e-215
749.2
355
100.0
CC00G27840
Cyclotella cryptica
3.4e-81
303.5
175
79.4
CC00G194040
Cyclotella cryptica
7.8e-78
292.4
162
83.3
CC00G30630
Cyclotella cryptica
1.3e-77
291.6
240
64.2
CC00G13370
Cyclotella cryptica
8.6e-77
288.9
175
77.1
CC00G196220
Cyclotella cryptica
1.9e-76
287.7
174
75.3
CC00G139530
Cyclotella cryptica
4.0e-74
280.0
175
77.7
CC00G60890
Cyclotella cryptica
1.1e-71
271.9
173
78.0
CC00G58250
Cyclotella cryptica
1.1e-60
235.3
132
82.6
CC00G194050
Cyclotella cryptica
2.5e-60
234.2
156
74.4
CC00G141560
Cyclotella cryptica
1.1e-55
218.8
131
74.8
CC00G30620
Cyclotella cryptica
1.2e-54
215.3
130
73.1
CC00G93880
Cyclotella cryptica
1.3e-53
211.8
179
57.0
CC00G57450
Cyclotella cryptica
1.1e-52
208.8
179
56.4
CC00G141190
Cyclotella cryptica
2.9e-48
194.1
181
52.5
CC00G82320
Cyclotella cryptica
1.6e-46
188.3
112
76.8
CC00G149930
Cyclotella cryptica
1.1e-34
149.1
136
52.9
CC00G24990
Cyclotella cryptica
2.4e-34
147.9
175
46.3
CC00G180360
Cyclotella cryptica
1.0e-32
142.5
119
58.0
CC00G75930
Cyclotella cryptica
3.6e-30
134.0
162
43.8
CC00G13380
Cyclotella cryptica
8.8e-29
129.4
87
72.4
CC00G55120
Cyclotella cryptica
9.4e-23
109.4
67
76.1
CC00G19530
Cyclotella cryptica
2.1e-22
108.2
67
74.6
CC00G193950
Cyclotella cryptica
1.8e-18
95.1
67
68.7
tho473640
Thalassiosira oceanica
2.7e-14
81.3
132
31.1
ptri86840
Phaeodactylum tricornutum
6.1e-14
80.1
230
27.0
ptri03600
Phaeodactylum tricornutum
8.0e-14
79.7
127
38.6
ptri161820
Phaeodactylum tricornutum
8.0e-14
79.7
124
37.1
ptri55220
Phaeodactylum tricornutum
1.0e-13
79.3
140
37.1
ptri00520
Phaeodactylum tricornutum
1.4e-13
79.0
124
36.3
ptri19120
Phaeodactylum tricornutum
1.4e-13
79.0
120
38.3
ptri12970
Phaeodactylum tricornutum
1.8e-13
78.6
120
38.3
gene4011
Fragilariopsis cylindrus
2.3e-13
78.2
129
36.4
ptri115460
Phaeodactylum tricornutum
2.3e-13
78.2
124
37.1
ptri151420
Phaeodactylum tricornutum
2.3e-13
78.2
124
36.3
ptri08730
Phaeodactylum tricornutum
4.0e-13
77.4
124
36.3
CC00G42010
Cyclotella cryptica
6.7e-13
76.6
53
66.0
ptri183250
Phaeodactylum tricornutum
6.7e-13
76.6
125
36.0
ptri206430
Phaeodactylum tricornutum
1.2e-12
75.9
120
36.7
ptri06240
Phaeodactylum tricornutum
1.5e-12
75.5
124
36.3
ptri184490
Phaeodactylum tricornutum
1.5e-12
75.5
124
36.3
ptri51710
Phaeodactylum tricornutum
4.4e-12
73.9
120
37.5
ptri03640
Phaeodactylum tricornutum
7.5e-12
73.2
124
35.5
ptri03680
Phaeodactylum tricornutum
7.5e-12
73.2
124
35.5
ptri89040
Phaeodactylum tricornutum
1.3e-11
72.4
124
34.7
ptri84500
Phaeodactylum tricornutum
3.7e-11
70.9
124
33.9
ptri01780
Phaeodactylum tricornutum
4.8e-11
70.5
124
33.9
ptri242890
Phaeodactylum tricornutum
1.4e-10
68.9
120
35.0
fso170320
Fistulifera solaris
1.8e-10
68.6
133
28.6
tho37180
Thalassiosira oceanica
1.8e-10
68.6
126
33.3
ptri171900
Phaeodactylum tricornutum
2.4e-10
68.2
121
33.1
ptri00380
Phaeodactylum tricornutum
5.3e-10
67.0
115
35.7
ptri12550
Phaeodactylum tricornutum
1.2e-09
65.9
101
37.6
ptri134970
Phaeodactylum tricornutum
1.6e-09
65.5
101
37.6
ptri161920
Phaeodactylum tricornutum
7.7e-09
63.2
96
36.5
ptri106160
Phaeodactylum tricornutum
2.2e-08
61.6
100
35.0
ptri158570
Phaeodactylum tricornutum
6.5e-08
60.1
92
39.1
ptri242090
Phaeodactylum tricornutum
2.5e-07
58.2
91
37.4
ptri67320
Phaeodactylum tricornutum
1.2e-06
55.8
128
28.1
ptri89300
Phaeodactylum tricornutum
1.6e-06
55.5
142
29.6
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (31 genes)
Thalassiosira pseudonana (0 genes)
Thalassiosira oceanica (2 genes)
Pseudo-nitzschia multiseries (0 genes)
Fistulifera solaris (1 genes)
Fragilariopsis cylindrus (1 genes)
Cyclotella cryptica (25 genes)
Aureococcus anophagefferens (0 genes)
Ectocarpus siliculosus (0 genes)
Nannochloropsis gaditana (0 genes)
Homo sapiens (0 genes)
Drosophila melanogaster (0 genes)
Caenorhabditis elegans (0 genes)
Saccharomyces cerevisiae strain S288C (0 genes)
Schizosaccharomyces pombe (0 genes)
Arabidopsis thaliana (0 genes)
Cyanidioschyzon merolae (0 genes)
Chondrus crispus (0 genes)
Galdieria sulphuraria (0 genes)
Emiliania huxleyi (0 genes)
Paramecium tetraurelia (0 genes)
Seminavis robusta (0 genes)
Synedra acus (0 genes)
Physcomitrella patens (0 genes)
Chlamydomonas reinhardtii (0 genes)
Pseudo-nitzschia multistriata (0 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
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Positions and Genes
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