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Interactive Phylogenetics Module
BLAST
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Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
CC00G27440
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
CC00G27440
Cyclotella cryptica
0.0e+00
1336.6
744
100.0
tps207050
Thalassiosira pseudonana
7.4e-163
575.9
775
49.3
sya00G252360
Synedra acus
1.2e-99
365.9
731
35.2
ptri167230
Phaeodactylum tricornutum
1.9e-86
322.0
555
38.2
Sro492_g153880
Seminavis robusta
3.7e-77
291.2
627
33.7
tho219560
Thalassiosira oceanica
1.1e-76
289.7
395
45.8
fso166840
Fistulifera solaris
8.7e-71
270.0
549
35.5
fso02980
Fistulifera solaris
7.4e-70
266.9
547
34.2
PSNMU-V1.4_AUG-EV-PASAV3_0038520
Pseudo-nitzschia multistriata
1.6e-69
265.8
610
33.9
tho502460
Thalassiosira oceanica
1.6e-64
249.2
305
46.6
ps00G114530
Pseudo-nitzschia multiseries
2.8e-61
238.4
563
32.1
gene10065
Fragilariopsis cylindrus
5.0e-58
227.6
743
28.8
gsu71910
Galdieria sulphuraria
2.3e-47
192.2
504
28.6
ps00G14990
Pseudo-nitzschia multiseries
3.2e-41
171.8
565
28.0
emh540590
Emiliania huxleyi
6.1e-40
167.5
558
28.1
Ec-01_006080
Ectocarpus siliculosus
2.8e-37
158.7
458
27.7
Pp3c14_23660
Physcomitrella patens
6.7e-31
137.5
460
27.4
ccr06940
Chondrus crispus
1.5e-30
136.3
528
26.7
emh725060
Emiliania huxleyi
4.4e-30
134.8
553
25.9
SPBC16A3.11
Schizosaccharomyces pombe
1.7e-29
132.9
549
24.2
Cre07.g338602
Chlamydomonas reinhardtii
5.5e-25
117.9
600
24.0
ENSG00000170734
Homo sapiens
1.2e-24
116.7
295
29.2
CM13G02840
Cyanidioschyzon merolae
2.7e-24
115.5
468
23.7
sya00G217370
Synedra acus
2.0e-22
109.4
536
27.6
AT5G44740
Arabidopsis thaliana
3.7e-21
105.1
304
28.3
pte645160
Paramecium tetraurelia
4.8e-21
104.8
514
23.7
Cre12.g524150
Chlamydomonas reinhardtii
4.5e-19
98.2
195
33.3
pte497140
Paramecium tetraurelia
7.7e-19
97.4
597
22.3
Naga_100010g99
Nannochloropsis gaditana
2.5e-17
92.4
191
30.9
Pp3c8_17250
Physcomitrella patens
3.3e-17
92.0
400
25.0
Sro88_g046710
Seminavis robusta
7.2e-17
90.9
475
24.8
WBGene00018721
Caenorhabditis elegans
1.4e-15
86.7
311
24.8
YDR419W
Saccharomyces cerevisiae strain S288C
1.8e-15
86.3
364
24.2
gene3526
Fragilariopsis cylindrus
3.0e-15
85.5
324
24.1
emh135140
Emiliania huxleyi
1.2e-11
73.6
294
26.2
emh81660
Emiliania huxleyi
1.2e-11
73.6
294
26.2
gsu33630
Galdieria sulphuraria
1.2e-11
73.6
252
27.8
ccr169420
Chondrus crispus
1.2e-08
63.5
209
26.8
Pp3c22_4740
Physcomitrella patens
8.0e-08
60.8
143
32.9
AT1G49980
Arabidopsis thaliana
3.1e-07
58.9
186
29.0
Ec-17_000370
Ectocarpus siliculosus
4.0e-07
58.5
180
26.7
ccr44120
Chondrus crispus
8.9e-07
57.4
164
27.4
CM01G00620
Cyanidioschyzon merolae
3.4e-06
55.5
248
27.0
emh530300
Emiliania huxleyi
3.4e-06
55.5
171
28.7
emh67860
Emiliania huxleyi
3.4e-06
55.5
171
28.7
AA0002G04000
Aureococcus anophagefferens
4.4e-06
55.1
60
40.0
AT5G44750
Arabidopsis thaliana
5.8e-06
54.7
135
28.9
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (1 genes)
Thalassiosira pseudonana (1 genes)
Thalassiosira oceanica (2 genes)
Pseudo-nitzschia multiseries (2 genes)
Fistulifera solaris (2 genes)
Fragilariopsis cylindrus (2 genes)
Cyclotella cryptica (1 genes)
Aureococcus anophagefferens (1 genes)
Ectocarpus siliculosus (2 genes)
Nannochloropsis gaditana (1 genes)
Homo sapiens (1 genes)
Drosophila melanogaster (0 genes)
Caenorhabditis elegans (1 genes)
Saccharomyces cerevisiae strain S288C (1 genes)
Schizosaccharomyces pombe (1 genes)
Arabidopsis thaliana (3 genes)
Cyanidioschyzon merolae (2 genes)
Chondrus crispus (3 genes)
Galdieria sulphuraria (2 genes)
Emiliania huxleyi (6 genes)
Paramecium tetraurelia (2 genes)
Seminavis robusta (2 genes)
Synedra acus (2 genes)
Physcomitrella patens (3 genes)
Chlamydomonas reinhardtii (2 genes)
Pseudo-nitzschia multistriata (1 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
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Positions and Genes
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