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Interactive Phylogenetics Module
BLAST
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Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
CC00G27290
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
CC00G27290
Cyclotella cryptica
0.0e+00
1857.8
1005
100.0
tps196810
Thalassiosira pseudonana
6.8e-220
765.8
1149
48.3
tho351560
Thalassiosira oceanica
4.0e-111
404.4
684
43.7
ptri231130
Phaeodactylum tricornutum
4.3e-89
331.3
528
41.1
gene16983
Fragilariopsis cylindrus
9.9e-86
320.1
527
39.7
fso126720
Fistulifera solaris
9.9e-86
320.1
549
39.5
fso45520
Fistulifera solaris
1.7e-85
319.3
549
39.5
ps00G48420
Pseudo-nitzschia multiseries
6.2e-80
300.8
527
39.1
Sro151_g069220
Seminavis robusta
3.9e-74
281.6
562
34.0
sya00G64310
Synedra acus
5.1e-74
281.2
573
38.6
PSNMU-V1.4_AUG-EV-PASAV3_0081680
Pseudo-nitzschia multistriata
9.3e-68
260.4
694
32.3
ps00G13900
Pseudo-nitzschia multiseries
1.3e-56
223.4
265
47.9
Ec-08_002240
Ectocarpus siliculosus
3.4e-46
188.7
525
27.8
AA0006G04730
Aureococcus anophagefferens
4.7e-19
98.6
518
25.9
SPAPB1A10.09
Schizosaccharomyces pombe
3.0e-18
95.9
221
28.5
YOR058C
Saccharomyces cerevisiae strain S288C
2.3e-13
79.7
249
28.9
Pp3c7_15580
Physcomitrella patens
2.1e-11
73.2
526
23.2
Pp3c2_23900
Physcomitrella patens
1.2e-09
67.4
528
21.2
ENSG00000198901
Homo sapiens
8.3e-08
61.2
217
25.3
Naga_101392g1
Nannochloropsis gaditana
1.6e-06
57.0
85
36.5
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (1 genes)
Thalassiosira pseudonana (1 genes)
Thalassiosira oceanica (1 genes)
Pseudo-nitzschia multiseries (2 genes)
Fistulifera solaris (2 genes)
Fragilariopsis cylindrus (1 genes)
Cyclotella cryptica (1 genes)
Aureococcus anophagefferens (1 genes)
Ectocarpus siliculosus (1 genes)
Nannochloropsis gaditana (1 genes)
Homo sapiens (1 genes)
Drosophila melanogaster (0 genes)
Caenorhabditis elegans (0 genes)
Saccharomyces cerevisiae strain S288C (1 genes)
Schizosaccharomyces pombe (1 genes)
Arabidopsis thaliana (0 genes)
Cyanidioschyzon merolae (0 genes)
Chondrus crispus (0 genes)
Galdieria sulphuraria (0 genes)
Emiliania huxleyi (0 genes)
Paramecium tetraurelia (0 genes)
Seminavis robusta (1 genes)
Synedra acus (1 genes)
Physcomitrella patens (2 genes)
Chlamydomonas reinhardtii (0 genes)
Pseudo-nitzschia multistriata (1 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
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Genes only
Positions and Genes
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