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Interactive Phylogenetics Module
BLAST
Workbench
Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
CC00G27230
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
CC00G27230
Cyclotella cryptica
0.0e+00
1708.3
852
100.0
tps220390
Thalassiosira pseudonana
0.0e+00
1334.7
851
79.1
Sro552_g165030
Seminavis robusta
0.0e+00
1095.9
849
65.7
sya00G34490
Synedra acus
0.0e+00
1082.0
849
64.1
ptri69210
Phaeodactylum tricornutum
9.4e-313
1074.3
849
64.7
sya00G132560
Synedra acus
2.4e-311
1069.3
833
64.6
ps00G156850
Pseudo-nitzschia multiseries
1.7e-304
1046.6
874
61.4
gene10467
Fragilariopsis cylindrus
4.9e-304
1045.0
872
61.1
PSNMU-V1.4_AUG-EV-PASAV3_0037070
Pseudo-nitzschia multistriata
9.3e-303
1040.8
861
60.9
CC00G91960
Cyclotella cryptica
4.6e-294
1011.9
853
59.8
CC00G196350
Cyclotella cryptica
4.6e-294
1011.9
853
59.8
tps112910
Thalassiosira pseudonana
5.1e-285
981.9
860
58.6
fso137450
Fistulifera solaris
1.3e-280
967.2
857
60.1
fso85390
Fistulifera solaris
1.2e-278
960.7
849
60.1
Naga_100111g8
Nannochloropsis gaditana
8.3e-251
868.2
868
55.9
Ec-09_003180
Ectocarpus siliculosus
6.1e-246
852.0
866
54.0
emh682570
Emiliania huxleyi
1.1e-239
831.2
785
54.9
tho115380
Thalassiosira oceanica
4.4e-236
819.3
550
74.9
Pp3c26_1330
Physcomitrella patens
6.4e-219
762.3
875
47.4
Pp3c9_1240
Physcomitrella patens
7.6e-212
738.8
876
47.0
AA0001G00710
Aureococcus anophagefferens
1.3e-208
728.0
863
48.7
Pp3c15_1150
Physcomitrella patens
6.6e-208
725.7
876
46.2
Cre17.g736650
Chlamydomonas reinhardtii
3.6e-206
719.9
901
46.3
AT1G63770
Arabidopsis thaliana
1.4e-205
718.0
906
44.5
sya00G168100
Synedra acus
2.0e-188
661.0
847
43.3
gsu64620
Galdieria sulphuraria
2.6e-188
660.6
873
43.2
sya00G159780
Synedra acus
3.5e-185
650.2
822
45.0
ccr94520
Chondrus crispus
5.9e-180
632.9
869
42.3
CM06G01820
Cyanidioschyzon merolae
2.0e-175
617.8
852
42.6
tho115400
Thalassiosira oceanica
2.2e-126
454.9
292
75.7
tho356920
Thalassiosira oceanica
4.1e-72
274.6
263
53.6
tho241300
Thalassiosira oceanica
2.6e-34
149.1
155
51.0
WBGene00003914
Caenorhabditis elegans
2.2e-33
146.0
493
27.6
CC00G134150
Cyclotella cryptica
1.3e-30
136.7
393
26.5
FBgn0261243
Drosophila melanogaster
3.8e-30
135.2
374
27.3
YHR047C
Saccharomyces cerevisiae strain S288C
1.1e-29
133.7
466
27.0
FBgn0052473
Drosophila melanogaster
5.5e-29
131.3
357
28.0
Sro1219_g253390
Seminavis robusta
7.2e-29
131.0
374
29.4
Pp3c19_6990
Physcomitrella patens
9.4e-29
130.6
373
27.6
ENSG00000113441
Homo sapiens
2.7e-28
129.0
369
26.3
ptri60100
Phaeodactylum tricornutum
1.4e-27
126.7
422
25.6
sya00G28140
Synedra acus
4.0e-27
125.2
382
28.3
SPBC1921.05
Schizosaccharomyces pombe
5.2e-27
124.8
448
25.9
YKL157W
Saccharomyces cerevisiae strain S288C
6.8e-27
124.4
382
27.2
CM19G03410
Cyanidioschyzon merolae
2.0e-26
122.9
481
25.6
WBGene00011587
Caenorhabditis elegans
3.4e-26
122.1
342
27.2
Ec-27_001510
Ectocarpus siliculosus
4.4e-26
121.7
388
29.4
ENSG00000138792
Homo sapiens
7.5e-26
120.9
389
24.9
Naga_100070g24
Nannochloropsis gaditana
7.5e-26
120.9
381
26.0
PSNMU-V1.4_AUG-EV-PASAV3_0067690
Pseudo-nitzschia multistriata
7.5e-26
120.9
374
24.9
tps41500
Thalassiosira pseudonana
9.8e-26
120.6
378
25.7
gene11630
Fragilariopsis cylindrus
1.3e-25
120.2
376
24.7
fso178070
Fistulifera solaris
2.8e-25
119.0
272
31.2
FBgn0038135
Drosophila melanogaster
3.7e-25
118.6
355
26.2
WBGene00010999
Caenorhabditis elegans
4.9e-25
118.2
360
26.1
ENSG00000141279
Homo sapiens
6.3e-25
117.9
394
25.4
Cre04.g213250
Chlamydomonas reinhardtii
8.3e-25
117.5
410
26.3
FBgn0038136
Drosophila melanogaster
1.1e-24
117.1
377
24.9
gsu83120
Galdieria sulphuraria
1.4e-24
116.7
450
24.2
fso19810
Fistulifera solaris
1.8e-24
116.3
272
30.9
AA0011G01290
Aureococcus anophagefferens
1.6e-23
113.2
385
25.5
AT4G33090
Arabidopsis thaliana
2.0e-23
112.8
379
26.1
WBGene00022073
Caenorhabditis elegans
7.7e-23
110.9
386
26.9
FBgn0039656
Drosophila melanogaster
7.7e-23
110.9
242
29.8
pte400570
Paramecium tetraurelia
7.7e-23
110.9
298
28.2
sya00G264910
Synedra acus
1.3e-22
110.2
271
27.3
FBgn0263236
Drosophila melanogaster
2.9e-22
109.0
342
26.3
WBGene00011000
Caenorhabditis elegans
5.0e-22
108.2
357
25.2
FBgn0039640
Drosophila melanogaster
6.6e-22
107.8
313
26.8
FBgn0015541
Drosophila melanogaster
1.5e-21
106.7
417
25.7
fso201650
Fistulifera solaris
1.9e-21
106.3
382
26.2
fso03360
Fistulifera solaris
3.3e-21
105.5
382
25.9
pte613340
Paramecium tetraurelia
3.3e-21
105.5
302
25.2
gsu105990
Galdieria sulphuraria
7.3e-21
104.4
371
25.9
pte610300
Paramecium tetraurelia
7.3e-21
104.4
287
27.5
FBgn0051445
Drosophila melanogaster
2.1e-20
102.8
238
29.8
ENSG00000164308
Homo sapiens
2.8e-20
102.4
249
28.1
Cre02.g076200
Chlamydomonas reinhardtii
4.7e-20
101.7
233
30.0
Ec-26_003100
Ectocarpus siliculosus
6.1e-20
101.3
369
26.0
ENSG00000164307
Homo sapiens
8.0e-20
100.9
247
27.1
WBGene00009865
Caenorhabditis elegans
1.4e-19
100.1
388
23.2
FBgn0051343
Drosophila melanogaster
4.0e-19
98.6
283
26.5
ENSG00000166825
Homo sapiens
2.6e-18
95.9
282
28.0
Sro1204_g252220
Seminavis robusta
1.3e-17
93.6
309
24.3
pte688010
Paramecium tetraurelia
4.9e-17
91.7
504
21.6
pte253710
Paramecium tetraurelia
8.3e-17
90.9
415
23.4
emh160180
Emiliania huxleyi
7.8e-15
84.3
53
73.6
FBgn0051198
Drosophila melanogaster
1.0e-14
84.0
286
24.8
ENSG00000072657
Homo sapiens
1.7e-14
83.2
299
25.8
WBGene00011803
Caenorhabditis elegans
3.0e-14
82.4
332
24.4
WBGene00012776
Caenorhabditis elegans
3.9e-14
82.0
308
26.0
pte531980
Paramecium tetraurelia
8.6e-14
80.9
340
25.3
sya00G86000
Synedra acus
8.6e-14
80.9
191
29.3
pte61780
Paramecium tetraurelia
1.1e-13
80.5
362
21.8
pte143120
Paramecium tetraurelia
1.5e-13
80.1
309
27.2
sya00G194710
Synedra acus
1.5e-13
80.1
344
25.6
ENSG00000172901
Homo sapiens
5.6e-13
78.2
246
28.5
pte335500
Paramecium tetraurelia
9.5e-13
77.4
294
23.8
Naga_100009g11
Nannochloropsis gaditana
2.1e-12
76.3
325
25.2
pte145250
Paramecium tetraurelia
2.1e-12
76.3
369
23.0
pte576620
Paramecium tetraurelia
2.1e-12
76.3
333
22.8
FBgn0046253
Drosophila melanogaster
1.4e-11
73.6
299
25.8
ccr130960
Chondrus crispus
4.0e-11
72.0
425
24.7
SPCC1322.05c
Schizosaccharomyces pombe
1.2e-10
70.5
284
23.2
CC00G174010
Cyclotella cryptica
1.5e-10
70.1
36
97.2
pte118570
Paramecium tetraurelia
7.5e-10
67.8
290
22.4
gsu106630
Galdieria sulphuraria
1.9e-08
63.2
298
24.2
gsu115180
Galdieria sulphuraria
3.2e-08
62.4
345
23.5
pte66070
Paramecium tetraurelia
3.5e-07
58.9
275
24.0
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (2 genes)
Thalassiosira pseudonana (3 genes)
Thalassiosira oceanica (4 genes)
Pseudo-nitzschia multiseries (1 genes)
Fistulifera solaris (6 genes)
Fragilariopsis cylindrus (2 genes)
Cyclotella cryptica (5 genes)
Aureococcus anophagefferens (2 genes)
Ectocarpus siliculosus (3 genes)
Nannochloropsis gaditana (3 genes)
Homo sapiens (8 genes)
Drosophila melanogaster (12 genes)
Caenorhabditis elegans (8 genes)
Saccharomyces cerevisiae strain S288C (2 genes)
Schizosaccharomyces pombe (2 genes)
Arabidopsis thaliana (2 genes)
Cyanidioschyzon merolae (2 genes)
Chondrus crispus (2 genes)
Galdieria sulphuraria (5 genes)
Emiliania huxleyi (2 genes)
Paramecium tetraurelia (13 genes)
Seminavis robusta (3 genes)
Synedra acus (8 genes)
Physcomitrella patens (4 genes)
Chlamydomonas reinhardtii (3 genes)
Pseudo-nitzschia multistriata (2 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
Positions only
Genes only
Positions and Genes
No editing