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Interactive Phylogenetics Module
BLAST
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Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
CC00G24810
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
CC00G24810
Cyclotella cryptica
1.1e-220
766.9
376
100.0
tps125520
Thalassiosira pseudonana
4.9e-147
522.3
374
67.9
tho504040
Thalassiosira oceanica
1.2e-116
421.4
379
57.3
Sro1401_g269510
Seminavis robusta
3.6e-105
383.3
376
51.9
ptri199550
Phaeodactylum tricornutum
2.0e-92
340.9
375
46.7
Sro24_g016390
Seminavis robusta
8.5e-91
335.5
391
48.3
PSNMU-V1.4_AUG-EV-PASAV3_0104110
Pseudo-nitzschia multistriata
1.5e-87
324.7
376
44.7
gene9106
Fragilariopsis cylindrus
4.1e-61
236.9
265
45.7
ps00G124820
Pseudo-nitzschia multiseries
2.1e-52
208.0
204
50.5
sya00G70820
Synedra acus
6.0e-44
179.9
366
32.2
Sro2764_g336580
Seminavis robusta
1.0e-43
179.1
345
34.2
Sro693_g188380
Seminavis robusta
1.1e-42
175.6
345
34.2
sya00G23160
Synedra acus
4.3e-42
173.7
366
32.0
gene49
Fragilariopsis cylindrus
6.2e-41
169.9
178
47.2
Sro527_g160560
Seminavis robusta
2.2e-38
161.4
380
31.3
Sro2718_g335430
Seminavis robusta
1.3e-35
152.1
376
30.6
Sro527_g160580
Seminavis robusta
2.3e-27
124.8
339
31.3
Ec-02_000990
Ectocarpus siliculosus
6.4e-22
106.7
264
30.7
Sro23_g015730
Seminavis robusta
1.2e-20
102.4
368
27.7
Sro707_g190550
Seminavis robusta
4.8e-17
90.5
349
26.1
tps108700
Thalassiosira pseudonana
8.4e-14
79.7
160
34.4
ENSG00000130347
Homo sapiens
2.5e-13
78.2
370
27.3
Cre06.g297400
Chlamydomonas reinhardtii
3.5e-12
74.3
304
26.3
gsu130820
Galdieria sulphuraria
1.3e-11
72.4
204
26.5
Ec-17_002760
Ectocarpus siliculosus
3.9e-11
70.9
280
27.1
gsu130840
Galdieria sulphuraria
5.1e-11
70.5
197
25.9
ccr102980
Chondrus crispus
8.7e-11
69.7
284
26.1
Pp3c26_10280
Physcomitrella patens
8.7e-11
69.7
220
30.0
AT3G15090
Arabidopsis thaliana
1.1e-10
69.3
227
26.4
Sro127_g060910
Seminavis robusta
3.3e-10
67.8
352
23.3
AT5G61510
Arabidopsis thaliana
5.7e-10
67.0
174
27.6
AT3G56460
Arabidopsis thaliana
7.4e-10
66.6
253
28.5
gene6780
Fragilariopsis cylindrus
7.4e-10
66.6
259
25.1
Cre16.g674050
Chlamydomonas reinhardtii
1.3e-09
65.9
204
28.4
Pp3c3_23410
Physcomitrella patens
1.6e-09
65.5
209
27.8
sya00G55350
Synedra acus
2.8e-09
64.7
152
28.3
CC00G139910
Cyclotella cryptica
6.3e-09
63.5
242
28.1
Pp3c13_1410
Physcomitrella patens
1.1e-08
62.8
224
29.5
CC00G210560
Cyclotella cryptica
1.4e-08
62.4
311
24.8
ENSG00000116791
Homo sapiens
2.4e-08
61.6
225
26.2
Sro142_g066270
Seminavis robusta
5.3e-08
60.5
176
29.5
ENSG00000171724
Homo sapiens
9.0e-08
59.7
339
23.3
Pp3s155_50
Physcomitrella patens
2.6e-07
58.2
344
25.9
tho380160
Thalassiosira oceanica
2.6e-07
58.2
157
29.3
SPCC1442.16c
Schizosaccharomyces pombe
3.4e-07
57.8
168
25.6
CC00G202220
Cyclotella cryptica
7.7e-07
56.6
234
26.1
Pp3c1_4270
Physcomitrella patens
1.0e-06
56.2
155
31.0
fso193860
Fistulifera solaris
1.3e-06
55.8
182
28.0
CC00G11550
Cyclotella cryptica
3.8e-06
54.3
167
26.9
YBR046C
Saccharomyces cerevisiae strain S288C
3.8e-06
54.3
178
28.1
sya00G39500
Synedra acus
3.8e-06
54.3
355
25.1
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (1 genes)
Thalassiosira pseudonana (2 genes)
Thalassiosira oceanica (2 genes)
Pseudo-nitzschia multiseries (1 genes)
Fistulifera solaris (1 genes)
Fragilariopsis cylindrus (3 genes)
Cyclotella cryptica (5 genes)
Aureococcus anophagefferens (0 genes)
Ectocarpus siliculosus (2 genes)
Nannochloropsis gaditana (0 genes)
Homo sapiens (3 genes)
Drosophila melanogaster (0 genes)
Caenorhabditis elegans (0 genes)
Saccharomyces cerevisiae strain S288C (1 genes)
Schizosaccharomyces pombe (1 genes)
Arabidopsis thaliana (3 genes)
Cyanidioschyzon merolae (0 genes)
Chondrus crispus (1 genes)
Galdieria sulphuraria (2 genes)
Emiliania huxleyi (0 genes)
Paramecium tetraurelia (0 genes)
Seminavis robusta (11 genes)
Synedra acus (4 genes)
Physcomitrella patens (5 genes)
Chlamydomonas reinhardtii (2 genes)
Pseudo-nitzschia multistriata (1 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
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