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Interactive Phylogenetics Module
BLAST
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Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
CC00G210670
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
CC00G210670
Cyclotella cryptica
0.0e+00
1276.5
611
100.0
CC00G68530
Cyclotella cryptica
8.4e-306
1050.4
722
71.1
CC00G159220
Cyclotella cryptica
4.4e-278
958.4
722
64.8
CC00G118720
Cyclotella cryptica
9.1e-268
924.1
722
63.0
CC00G92410
Cyclotella cryptica
1.1e-244
847.4
646
64.1
CC00G07980
Cyclotella cryptica
2.0e-222
773.5
581
64.4
CC00G139380
Cyclotella cryptica
3.3e-201
703.0
562
61.4
tho158000
Thalassiosira oceanica
7.7e-174
612.1
683
47.0
CC00G151980
Cyclotella cryptica
1.4e-167
591.3
360
74.2
tho26600
Thalassiosira oceanica
5.2e-162
572.8
663
46.0
tho139880
Thalassiosira oceanica
1.5e-161
571.2
683
44.9
tho01120
Thalassiosira oceanica
2.8e-160
567.0
663
45.6
tho163240
Thalassiosira oceanica
1.2e-153
545.0
668
44.0
tho418560
Thalassiosira oceanica
4.2e-148
526.6
663
44.9
tho59300
Thalassiosira oceanica
7.2e-148
525.8
686
43.0
CC00G38470
Cyclotella cryptica
1.8e-138
494.6
429
61.1
CC00G47840
Cyclotella cryptica
1.6e-126
454.9
683
38.7
CC00G56080
Cyclotella cryptica
1.6e-126
454.9
248
82.3
CC00G75400
Cyclotella cryptica
3.5e-126
453.8
670
39.3
CC00G62800
Cyclotella cryptica
3.0e-101
370.9
364
54.7
CC00G56090
Cyclotella cryptica
1.3e-93
345.5
333
56.2
CC00G148530
Cyclotella cryptica
8.4e-80
299.7
261
54.0
PSNMU-V1.4_AUG-EV-PASAV3_0089660
Pseudo-nitzschia multistriata
1.8e-77
292.0
676
29.9
PSNMU-V1.4_AUG-EV-PASAV3_0022040
Pseudo-nitzschia multistriata
3.7e-75
284.3
634
30.8
PSNMU-V1.4_AUG-EV-PASAV3_0020960
Pseudo-nitzschia multistriata
6.3e-75
283.5
580
33.1
CC00G177010
Cyclotella cryptica
3.6e-70
267.7
146
89.0
fso12240
Fistulifera solaris
9.7e-60
233.0
576
28.6
CC00G05190
Cyclotella cryptica
6.5e-48
193.7
130
73.1
tho611060
Thalassiosira oceanica
1.0e-32
143.3
95
66.3
ps00G11210
Pseudo-nitzschia multiseries
9.2e-26
120.2
170
40.6
Naga_100433g2
Nannochloropsis gaditana
3.5e-25
118.2
424
27.1
tho590320
Thalassiosira oceanica
5.0e-24
114.4
75
68.0
Naga_101142g1
Nannochloropsis gaditana
3.6e-22
108.2
423
26.0
Naga_100167g13
Nannochloropsis gaditana
5.2e-21
104.4
294
27.9
fso179140
Fistulifera solaris
1.7e-19
99.4
122
43.4
Naga_101146g2
Nannochloropsis gaditana
1.8e-18
95.9
434
24.9
Naga_100549g4
Nannochloropsis gaditana
7.0e-18
94.0
372
26.3
ps00G79480
Pseudo-nitzschia multiseries
9.2e-18
93.6
132
41.7
ps00G160950
Pseudo-nitzschia multiseries
2.0e-17
92.4
251
28.7
Naga_100497g3
Nannochloropsis gaditana
1.1e-15
86.7
141
38.3
ccr162020
Chondrus crispus
3.3e-15
85.1
485
21.9
Naga_101002g3
Nannochloropsis gaditana
4.3e-15
84.7
141
37.6
Naga_100235g1
Nannochloropsis gaditana
5.6e-15
84.3
141
37.6
ps00G109810
Pseudo-nitzschia multiseries
5.6e-15
84.3
132
39.4
ccr12580
Chondrus crispus
9.5e-15
83.6
425
23.1
Naga_100999g3
Nannochloropsis gaditana
1.2e-14
83.2
141
37.6
Naga_100252g2
Nannochloropsis gaditana
2.1e-14
82.4
126
40.5
Naga_102250g1
Nannochloropsis gaditana
2.8e-14
82.0
126
37.3
ccr12540
Chondrus crispus
3.6e-14
81.6
430
22.8
Naga_100294g4
Nannochloropsis gaditana
3.6e-14
81.6
141
36.9
Ec-05_005370
Ectocarpus siliculosus
4.7e-14
81.3
438
21.5
Ec-12_008930
Ectocarpus siliculosus
4.7e-14
81.3
438
21.5
Naga_101065g1
Nannochloropsis gaditana
4.7e-14
81.3
126
39.7
Pp3c23_8160
Physcomitrella patens
6.2e-14
80.9
372
25.3
ps00G19170
Pseudo-nitzschia multiseries
8.0e-14
80.5
122
42.6
ccr10700
Chondrus crispus
2.3e-13
79.0
142
31.7
ccr97700
Chondrus crispus
2.3e-13
79.0
142
31.7
ccr162420
Chondrus crispus
4.0e-13
78.2
485
21.2
ccr12600
Chondrus crispus
5.2e-13
77.8
424
23.6
ccr52380
Chondrus crispus
1.5e-12
76.3
133
31.6
ccr185520
Chondrus crispus
3.4e-12
75.1
133
30.8
ccr30000
Chondrus crispus
4.4e-12
74.7
133
31.6
ccr173000
Chondrus crispus
4.4e-12
74.7
129
31.8
ccr97560
Chondrus crispus
7.5e-12
73.9
133
31.6
ccr195620
Chondrus crispus
1.3e-11
73.2
155
31.6
Naga_100055g1
Nannochloropsis gaditana
4.9e-11
71.2
94
42.6
Naga_100167g12
Nannochloropsis gaditana
4.9e-11
71.2
125
38.4
ccr143000
Chondrus crispus
1.4e-10
69.7
127
32.3
ccr106200
Chondrus crispus
4.1e-10
68.2
134
30.6
ccr77380
Chondrus crispus
5.4e-10
67.8
133
29.3
ccr187100
Chondrus crispus
9.2e-10
67.0
134
29.1
Naga_100294g10
Nannochloropsis gaditana
9.2e-10
67.0
90
43.3
Pp3c3_35870
Physcomitrella patens
9.2e-10
67.0
123
30.1
gene3462
Fragilariopsis cylindrus
1.2e-09
66.6
124
35.5
sya00G153830
Synedra acus
1.2e-09
66.6
144
30.6
Pp3c2_13360
Physcomitrella patens
1.6e-09
66.2
122
32.0
Ec-21_000440
Ectocarpus siliculosus
2.0e-09
65.9
137
28.5
ccr186220
Chondrus crispus
2.7e-09
65.5
136
29.4
ccr12660
Chondrus crispus
3.5e-09
65.1
121
30.6
ptri24690
Phaeodactylum tricornutum
3.5e-09
65.1
144
25.7
ptri237730
Phaeodactylum tricornutum
3.5e-09
65.1
144
25.7
fso200820
Fistulifera solaris
1.0e-08
63.5
310
21.6
ccr97800
Chondrus crispus
1.3e-08
63.2
134
29.9
fso79470
Fistulifera solaris
1.3e-08
63.2
310
21.6
sya00G35570
Synedra acus
1.3e-08
63.2
175
25.7
ps00G109820
Pseudo-nitzschia multiseries
1.7e-08
62.8
72
47.2
PSNMU-V1.4_AUG-EV-PASAV3_0076850
Pseudo-nitzschia multistriata
2.3e-08
62.4
138
31.2
tho219020
Thalassiosira oceanica
2.3e-08
62.4
143
31.5
ccr46400
Chondrus crispus
3.0e-08
62.0
132
32.6
fso11860
Fistulifera solaris
3.0e-08
62.0
147
27.9
fso06610
Fistulifera solaris
3.9e-08
61.6
145
27.6
Pp3c1_34280
Physcomitrella patens
3.9e-08
61.6
120
30.0
fso200830
Fistulifera solaris
5.0e-08
61.2
145
27.6
ptri98580
Phaeodactylum tricornutum
5.0e-08
61.2
144
29.9
Ec-07_000280
Ectocarpus siliculosus
6.6e-08
60.8
128
30.5
ptri12390
Phaeodactylum tricornutum
6.6e-08
60.8
144
29.2
sya00G180660
Synedra acus
6.6e-08
60.8
167
23.4
Cre03.g183950
Chlamydomonas reinhardtii
8.6e-08
60.5
127
29.9
PSNMU-V1.4_AUG-EV-PASAV3_0071490
Pseudo-nitzschia multistriata
8.6e-08
60.5
153
30.7
Cre03.g186800
Chlamydomonas reinhardtii
1.1e-07
60.1
127
29.9
Cre01.g045850
Chlamydomonas reinhardtii
1.1e-07
60.1
127
29.9
ptri98640
Phaeodactylum tricornutum
1.9e-07
59.3
137
30.7
ccr162000
Chondrus crispus
2.5e-07
58.9
135
31.1
Sro158_g071660
Seminavis robusta
2.5e-07
58.9
138
29.7
sya00G60900
Synedra acus
2.5e-07
58.9
155
25.2
tho89820
Thalassiosira oceanica
2.5e-07
58.9
144
28.5
ccr158720
Chondrus crispus
3.3e-07
58.5
132
31.8
tho158140
Thalassiosira oceanica
3.3e-07
58.5
137
28.5
tho02320
Thalassiosira oceanica
4.3e-07
58.2
160
23.8
tho329240
Thalassiosira oceanica
4.3e-07
58.2
135
30.4
ccr121940
Chondrus crispus
5.6e-07
57.8
132
31.8
Ec-03_001760
Ectocarpus siliculosus
5.6e-07
57.8
132
29.5
Pp3c13_150
Physcomitrella patens
5.6e-07
57.8
128
31.2
Pp3s38_160
Physcomitrella patens
7.3e-07
57.4
108
29.6
Cre16.g673450
Chlamydomonas reinhardtii
9.5e-07
57.0
127
29.1
ps00G00740
Pseudo-nitzschia multiseries
9.5e-07
57.0
129
31.8
sya00G49690
Synedra acus
9.5e-07
57.0
135
24.4
fso63650
Fistulifera solaris
1.2e-06
56.6
144
29.2
ptri104120
Phaeodactylum tricornutum
1.2e-06
56.6
148
27.7
tho86000
Thalassiosira oceanica
1.6e-06
56.2
137
28.5
Sro52_g031241
Seminavis robusta
2.1e-06
55.8
131
29.8
ccr06520
Chondrus crispus
2.8e-06
55.5
128
32.0
CC00G169820
Cyclotella cryptica
2.8e-06
55.5
137
31.4
Pp3c7_15950
Physcomitrella patens
2.8e-06
55.5
112
33.0
PSNMU-V1.4_AUG-EV-PASAV3_0006560
Pseudo-nitzschia multistriata
3.6e-06
55.1
122
32.0
sya00G170370
Synedra acus
3.6e-06
55.1
180
26.7
tho94380
Thalassiosira oceanica
3.6e-06
55.1
142
27.5
ccr170160
Chondrus crispus
4.7e-06
54.7
132
30.3
CC00G87590
Cyclotella cryptica
6.2e-06
54.3
178
28.1
CC00G110590
Cyclotella cryptica
6.2e-06
54.3
140
32.1
CC00G139280
Cyclotella cryptica
6.2e-06
54.3
181
27.6
ps00G140070
Pseudo-nitzschia multiseries
8.1e-06
53.9
129
31.8
ps00G142230
Pseudo-nitzschia multiseries
8.1e-06
53.9
74
44.6
ps00G149270
Pseudo-nitzschia multiseries
8.1e-06
53.9
74
44.6
sya00G80980
Synedra acus
8.1e-06
53.9
141
26.2
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (6 genes)
Thalassiosira pseudonana (0 genes)
Thalassiosira oceanica (16 genes)
Pseudo-nitzschia multiseries (10 genes)
Fistulifera solaris (8 genes)
Fragilariopsis cylindrus (1 genes)
Cyclotella cryptica (21 genes)
Aureococcus anophagefferens (0 genes)
Ectocarpus siliculosus (5 genes)
Nannochloropsis gaditana (16 genes)
Homo sapiens (0 genes)
Drosophila melanogaster (0 genes)
Caenorhabditis elegans (0 genes)
Saccharomyces cerevisiae strain S288C (0 genes)
Schizosaccharomyces pombe (0 genes)
Arabidopsis thaliana (0 genes)
Cyanidioschyzon merolae (0 genes)
Chondrus crispus (26 genes)
Galdieria sulphuraria (0 genes)
Emiliania huxleyi (0 genes)
Paramecium tetraurelia (0 genes)
Seminavis robusta (2 genes)
Synedra acus (7 genes)
Physcomitrella patens (7 genes)
Chlamydomonas reinhardtii (4 genes)
Pseudo-nitzschia multistriata (6 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
Positions only
Genes only
Positions and Genes
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