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Interactive Phylogenetics Module
BLAST
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Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
CC00G210280
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
CC00G210280
Cyclotella cryptica
5.4e-276
951.0
472
100.0
CC00G134960
Cyclotella cryptica
2.0e-185
650.2
397
81.4
CC00G143610
Cyclotella cryptica
4.4e-185
649.0
462
72.3
CC00G193540
Cyclotella cryptica
7.7e-182
638.3
465
68.6
CC00G177430
Cyclotella cryptica
3.8e-181
636.0
463
68.7
CC00G118060
Cyclotella cryptica
1.4e-178
627.5
464
67.5
CC00G157170
Cyclotella cryptica
3.4e-177
622.9
470
67.2
CC00G169820
Cyclotella cryptica
7.5e-177
621.7
466
66.7
CC00G143730
Cyclotella cryptica
1.7e-157
557.4
303
88.8
CC00G76080
Cyclotella cryptica
5.3e-82
306.6
206
75.2
CC00G117370
Cyclotella cryptica
8.3e-67
256.1
197
64.5
CC00G200330
Cyclotella cryptica
1.4e-58
228.8
163
67.5
CC00G124100
Cyclotella cryptica
7.3e-39
163.3
130
62.3
sya00G07560
Synedra acus
1.2e-38
162.5
466
25.5
sya00G230040
Synedra acus
1.2e-36
156.0
437
27.9
sya00G236140
Synedra acus
8.3e-35
149.8
434
27.2
sya00G169930
Synedra acus
5.4e-34
147.1
455
26.8
sya00G178340
Synedra acus
3.9e-32
141.0
495
25.5
sya00G234880
Synedra acus
5.1e-32
140.6
459
24.8
sya00G171150
Synedra acus
2.5e-31
138.3
472
25.6
sya00G96210
Synedra acus
8.1e-30
133.3
476
26.1
sya00G96250
Synedra acus
8.1e-30
133.3
476
26.1
sya00G109280
Synedra acus
8.1e-30
133.3
476
26.1
sya00G213030
Synedra acus
8.1e-30
133.3
476
26.1
fso21490
Fistulifera solaris
1.8e-29
132.1
456
25.7
fso112160
Fistulifera solaris
5.2e-29
130.6
445
24.7
fso122320
Fistulifera solaris
5.2e-29
130.6
440
24.5
sya00G89520
Synedra acus
9.9e-28
126.3
476
25.2
sya00G21530
Synedra acus
3.8e-27
124.4
422
26.3
sya00G249510
Synedra acus
1.2e-25
119.4
368
26.1
sya00G228420
Synedra acus
4.6e-25
117.5
440
22.7
Sro1139_g245450
Seminavis robusta
1.7e-24
115.5
423
24.3
Sro532_g161440
Seminavis robusta
9.6e-23
109.8
425
22.6
sya00G82960
Synedra acus
1.4e-21
105.9
360
26.9
Sro644_g180520
Seminavis robusta
5.2e-21
104.0
339
24.8
sya00G231320
Synedra acus
1.2e-20
102.8
265
24.2
sya00G42170
Synedra acus
9.9e-20
99.8
264
29.9
sya00G244870
Synedra acus
3.8e-19
97.8
344
23.3
sya00G74320
Synedra acus
1.9e-18
95.5
256
30.5
sya00G76750
Synedra acus
1.9e-18
95.5
256
30.5
sya00G37690
Synedra acus
2.4e-18
95.1
369
24.1
sya00G132040
Synedra acus
2.4e-18
95.1
466
22.1
sya00G259780
Synedra acus
4.2e-18
94.4
205
29.3
CC00G168350
Cyclotella cryptica
9.3e-18
93.2
49
83.7
sya00G165310
Synedra acus
1.2e-17
92.8
480
22.9
sya00G175600
Synedra acus
3.5e-17
91.3
306
24.8
sya00G59810
Synedra acus
4.6e-17
90.9
334
26.9
sya00G167910
Synedra acus
3.9e-16
87.8
454
23.8
sya00G264800
Synedra acus
1.5e-15
85.9
154
35.1
sya00G154570
Synedra acus
3.3e-15
84.7
433
23.1
Sro2342_g324110
Seminavis robusta
1.6e-14
82.4
388
23.2
sya00G169280
Synedra acus
1.6e-14
82.4
260
23.1
sya00G80770
Synedra acus
2.8e-14
81.6
464
22.2
sya00G75680
Synedra acus
1.1e-13
79.7
318
25.2
sya00G188070
Synedra acus
1.1e-13
79.7
370
21.9
gene1105
Fragilariopsis cylindrus
1.4e-13
79.3
369
22.0
sya00G58250
Synedra acus
1.8e-13
79.0
248
29.4
fso159750
Fistulifera solaris
4.0e-13
77.8
429
20.7
sya00G60460
Synedra acus
6.9e-13
77.0
271
29.2
ps00G05450
Pseudo-nitzschia multiseries
9.0e-13
76.6
401
21.7
sya00G62610
Synedra acus
1.5e-12
75.9
303
22.1
sya00G15860
Synedra acus
2.6e-12
75.1
331
24.8
sya00G234710
Synedra acus
7.6e-12
73.6
471
23.6
sya00G133700
Synedra acus
2.9e-11
71.6
236
25.0
PSNMU-V1.4_AUG-EV-PASAV3_0065300
Pseudo-nitzschia multistriata
4.9e-11
70.9
229
21.8
sya00G185020
Synedra acus
6.4e-11
70.5
202
23.3
sya00G02010
Synedra acus
8.4e-11
70.1
489
21.7
sya00G157380
Synedra acus
8.4e-11
70.1
189
24.9
sya00G31870
Synedra acus
1.4e-10
69.3
235
20.9
PSNMU-V1.4_AUG-EV-PASAV3_0053460
Pseudo-nitzschia multistriata
4.2e-10
67.8
385
21.0
sya00G84750
Synedra acus
1.6e-09
65.9
377
19.9
CC00G117070
Cyclotella cryptica
3.5e-09
64.7
439
20.5
fso186580
Fistulifera solaris
1.8e-08
62.4
420
20.7
sya00G160600
Synedra acus
2.3e-08
62.0
210
24.8
ps00G164800
Pseudo-nitzschia multiseries
5.1e-08
60.8
338
21.9
sya00G203930
Synedra acus
5.1e-08
60.8
197
21.3
sya00G111990
Synedra acus
8.7e-08
60.1
247
25.5
sya00G177340
Synedra acus
1.5e-07
59.3
121
27.3
fso109400
Fistulifera solaris
1.9e-07
58.9
440
21.1
sya00G155050
Synedra acus
2.5e-07
58.5
366
18.6
ps00G86560
Pseudo-nitzschia multiseries
5.6e-07
57.4
250
22.4
CC00G150720
Cyclotella cryptica
9.6e-07
56.6
399
19.0
sya00G89880
Synedra acus
2.1e-06
55.5
294
20.1
fso160210
Fistulifera solaris
2.8e-06
55.1
400
19.0
sya00G44760
Synedra acus
2.8e-06
55.1
234
18.4
sya00G67810
Synedra acus
4.8e-06
54.3
93
36.6
sya00G101840
Synedra acus
4.8e-06
54.3
231
25.1
sya00G04350
Synedra acus
6.2e-06
53.9
262
22.5
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (0 genes)
Thalassiosira pseudonana (0 genes)
Thalassiosira oceanica (0 genes)
Pseudo-nitzschia multiseries (3 genes)
Fistulifera solaris (7 genes)
Fragilariopsis cylindrus (1 genes)
Cyclotella cryptica (16 genes)
Aureococcus anophagefferens (0 genes)
Ectocarpus siliculosus (0 genes)
Nannochloropsis gaditana (0 genes)
Homo sapiens (0 genes)
Drosophila melanogaster (0 genes)
Caenorhabditis elegans (0 genes)
Saccharomyces cerevisiae strain S288C (0 genes)
Schizosaccharomyces pombe (0 genes)
Arabidopsis thaliana (0 genes)
Cyanidioschyzon merolae (0 genes)
Chondrus crispus (0 genes)
Galdieria sulphuraria (0 genes)
Emiliania huxleyi (0 genes)
Paramecium tetraurelia (0 genes)
Seminavis robusta (4 genes)
Synedra acus (55 genes)
Physcomitrella patens (0 genes)
Chlamydomonas reinhardtii (0 genes)
Pseudo-nitzschia multistriata (2 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
Positions only
Genes only
Positions and Genes
No editing