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Interactive Phylogenetics Module
BLAST
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Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
CC00G208890
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
CC00G208890
Cyclotella cryptica
7.7e-154
544.7
314
100.0
tho132280
Thalassiosira oceanica
1.7e-31
138.3
248
37.5
tps32580
Thalassiosira pseudonana
5.2e-17
90.1
234
31.6
CC00G177200
Cyclotella cryptica
7.8e-13
76.3
242
28.9
sya00G202310
Synedra acus
1.5e-11
72.0
87
36.8
gene6858
Fragilariopsis cylindrus
8.1e-10
66.2
70
40.0
ps00G03830
Pseudo-nitzschia multiseries
2.3e-09
64.7
65
41.5
Sro1795_g298020
Seminavis robusta
1.2e-08
62.4
66
40.9
ptri86720
Phaeodactylum tricornutum
1.5e-08
62.0
85
32.9
ps00G03820
Pseudo-nitzschia multiseries
2.0e-08
61.6
63
36.5
sya00G205770
Synedra acus
2.6e-08
61.2
65
41.5
AT5G46650
Arabidopsis thaliana
4.4e-08
60.5
74
37.8
AT3G19950
Arabidopsis thaliana
5.8e-08
60.1
68
33.8
tps67470
Thalassiosira pseudonana
5.8e-08
60.1
101
31.7
sya00G203630
Synedra acus
1.7e-07
58.5
79
34.2
AT3G14320
Arabidopsis thaliana
2.9e-07
57.8
81
34.6
FBgn0037653
Drosophila melanogaster
2.9e-07
57.8
85
27.1
sya00G202290
Synedra acus
2.9e-07
57.8
65
38.5
CC00G26000
Cyclotella cryptica
3.7e-07
57.4
82
32.9
CC00G174850
Cyclotella cryptica
3.7e-07
57.4
82
32.9
fso123750
Fistulifera solaris
3.7e-07
57.4
60
36.7
PSNMU-V1.4_AUG-EV-PASAV3_0079000
Pseudo-nitzschia multistriata
3.7e-07
57.4
60
38.3
Sro939_g222490
Seminavis robusta
3.7e-07
57.4
86
33.7
ptri124500
Phaeodactylum tricornutum
6.4e-07
56.6
58
37.9
AT4G17920
Arabidopsis thaliana
8.3e-07
56.2
99
32.3
gene7079
Fragilariopsis cylindrus
8.3e-07
56.2
87
28.7
fso54490
Fistulifera solaris
8.3e-07
56.2
60
36.7
ptri170720
Phaeodactylum tricornutum
1.4e-06
55.5
84
29.8
AT5G37250
Arabidopsis thaliana
2.4e-06
54.7
90
34.4
Pp3c14_14600
Physcomitrella patens
2.4e-06
54.7
63
34.9
pte213090
Paramecium tetraurelia
2.4e-06
54.7
65
36.9
AT4G17905
Arabidopsis thaliana
3.2e-06
54.3
63
34.9
AT4G30400
Arabidopsis thaliana
3.2e-06
54.3
81
28.4
gsu64960
Galdieria sulphuraria
3.2e-06
54.3
89
31.5
ENSG00000070423
Homo sapiens
3.2e-06
54.3
87
27.6
ps00G104930
Pseudo-nitzschia multiseries
3.2e-06
54.3
68
27.9
pte144630
Paramecium tetraurelia
3.2e-06
54.3
77
31.2
Sro352_g124190
Seminavis robusta
3.2e-06
54.3
61
37.7
AA0020G00210
Aureococcus anophagefferens
4.1e-06
53.9
64
34.4
sya00G148510
Synedra acus
4.1e-06
53.9
62
33.9
sya00G148520
Synedra acus
4.1e-06
53.9
62
33.9
sya00G148540
Synedra acus
4.1e-06
53.9
62
33.9
PSNMU-V1.4_AUG-EV-PASAV3_0076380
Pseudo-nitzschia multistriata
5.4e-06
53.5
68
27.9
Pp3c18_7090
Physcomitrella patens
5.4e-06
53.5
69
33.3
Sro492_g153890
Seminavis robusta
5.4e-06
53.5
84
29.8
sya00G14640
Synedra acus
5.4e-06
53.5
65
38.5
AT4G26400
Arabidopsis thaliana
7.1e-06
53.1
91
31.9
AT4G33565
Arabidopsis thaliana
7.1e-06
53.1
66
33.3
AT5G43420
Arabidopsis thaliana
7.1e-06
53.1
71
32.4
WBGene00012194
Caenorhabditis elegans
7.1e-06
53.1
77
28.6
ptri70550
Phaeodactylum tricornutum
7.1e-06
53.1
63
31.7
AT5G56340
Arabidopsis thaliana
9.2e-06
52.8
78
34.6
Sro239_g096030
Seminavis robusta
9.2e-06
52.8
67
32.8
Sro1264_g257390
Seminavis robusta
9.2e-06
52.8
69
34.8
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (4 genes)
Thalassiosira pseudonana (2 genes)
Thalassiosira oceanica (1 genes)
Pseudo-nitzschia multiseries (3 genes)
Fistulifera solaris (2 genes)
Fragilariopsis cylindrus (2 genes)
Cyclotella cryptica (4 genes)
Aureococcus anophagefferens (1 genes)
Ectocarpus siliculosus (0 genes)
Nannochloropsis gaditana (0 genes)
Homo sapiens (1 genes)
Drosophila melanogaster (1 genes)
Caenorhabditis elegans (1 genes)
Saccharomyces cerevisiae strain S288C (0 genes)
Schizosaccharomyces pombe (0 genes)
Arabidopsis thaliana (11 genes)
Cyanidioschyzon merolae (0 genes)
Chondrus crispus (0 genes)
Galdieria sulphuraria (1 genes)
Emiliania huxleyi (0 genes)
Paramecium tetraurelia (2 genes)
Seminavis robusta (6 genes)
Synedra acus (8 genes)
Physcomitrella patens (2 genes)
Chlamydomonas reinhardtii (0 genes)
Pseudo-nitzschia multistriata (2 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
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Positions and Genes
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