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Interactive Phylogenetics Module
BLAST
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Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
CC00G206250
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
CC00G206250
Cyclotella cryptica
5.2e-207
721.5
351
100.0
tps71590
Thalassiosira pseudonana
6.1e-91
335.9
308
56.8
tho343000
Thalassiosira oceanica
8.2e-88
325.5
327
53.2
Sro43_g026000
Seminavis robusta
1.0e-77
292.0
335
45.4
ptri230990
Phaeodactylum tricornutum
7.5e-73
275.8
309
48.2
fso54870
Fistulifera solaris
1.6e-59
231.5
249
47.8
PSNMU-V1.4_AUG-EV-PASAV3_0085960
Pseudo-nitzschia multistriata
2.1e-59
231.1
279
44.8
fso05880
Fistulifera solaris
5.2e-58
226.5
299
44.1
ps00G195720
Pseudo-nitzschia multiseries
1.3e-53
211.8
162
61.1
sya00G248240
Synedra acus
1.5e-52
208.4
275
43.3
sya00G11270
Synedra acus
7.3e-52
206.1
269
43.9
gene16482
Fragilariopsis cylindrus
7.5e-49
196.1
217
49.3
Ec-01_008620
Ectocarpus siliculosus
1.8e-42
174.9
296
36.8
Cre16.g675250
Chlamydomonas reinhardtii
1.2e-35
152.1
267
32.6
Naga_100773g2
Nannochloropsis gaditana
4.7e-35
150.2
183
44.3
gsu90200
Galdieria sulphuraria
8.1e-35
149.4
248
34.3
Ec-11_004970
Ectocarpus siliculosus
1.1e-34
149.1
160
47.5
ccr04760
Chondrus crispus
3.1e-34
147.5
300
34.3
AT1G47578
Arabidopsis thaliana
1.2e-33
145.6
172
45.3
AT4G31050
Arabidopsis thaliana
7.6e-33
142.9
263
32.7
Pp3c12_18570
Physcomitrella patens
2.2e-32
141.4
274
34.7
tps183550
Thalassiosira pseudonana
2.9e-32
141.0
161
46.0
CC00G202690
Cyclotella cryptica
3.2e-31
137.5
156
47.4
ptri204180
Phaeodactylum tricornutum
4.2e-31
137.1
154
46.1
Sro720_g192630
Seminavis robusta
9.3e-31
136.0
316
28.8
Naga_100014g80
Nannochloropsis gaditana
1.6e-30
135.2
267
31.1
emh465520
Emiliania huxleyi
2.7e-30
134.4
169
43.8
tho151280
Thalassiosira oceanica
7.8e-30
132.9
129
51.9
AA0006G05720
Aureococcus anophagefferens
6.6e-29
129.8
265
32.8
gene17095
Fragilariopsis cylindrus
6.6e-29
129.8
161
40.4
gsu90180
Galdieria sulphuraria
7.3e-28
126.3
191
36.6
emh302820
Emiliania huxleyi
2.1e-27
124.8
161
42.2
sya00G205860
Synedra acus
2.1e-27
124.8
168
41.1
emh308680
Emiliania huxleyi
4.8e-27
123.6
161
41.6
PSNMU-V1.4_AUG-EV-PASAV3_0107210
Pseudo-nitzschia multistriata
4.8e-27
123.6
165
41.2
FBgn0037251
Drosophila melanogaster
2.6e-25
117.9
154
39.0
CM12G00140
Cyanidioschyzon merolae
3.4e-25
117.5
150
43.3
CM18G02770
Cyanidioschyzon merolae
3.4e-25
117.5
150
43.3
ps00G63460
Pseudo-nitzschia multiseries
5.8e-25
116.7
134
44.0
sya00G160540
Synedra acus
7.9e-22
106.3
136
41.9
Pp3c27_7140
Physcomitrella patens
5.1e-21
103.6
158
37.3
AT1G04640
Arabidopsis thaliana
5.6e-20
100.1
160
35.0
ps00G157830
Pseudo-nitzschia multiseries
7.4e-20
99.8
163
37.4
SPAC4F10.05c
Schizosaccharomyces pombe
3.1e-18
94.4
123
41.5
Cre01.g010350
Chlamydomonas reinhardtii
4.0e-18
94.0
186
32.8
ENSG00000175536
Homo sapiens
1.2e-14
82.4
156
33.3
YLR239C
Saccharomyces cerevisiae strain S288C
6.0e-14
80.1
161
35.4
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (2 genes)
Thalassiosira pseudonana (2 genes)
Thalassiosira oceanica (2 genes)
Pseudo-nitzschia multiseries (3 genes)
Fistulifera solaris (2 genes)
Fragilariopsis cylindrus (2 genes)
Cyclotella cryptica (2 genes)
Aureococcus anophagefferens (1 genes)
Ectocarpus siliculosus (2 genes)
Nannochloropsis gaditana (2 genes)
Homo sapiens (1 genes)
Drosophila melanogaster (1 genes)
Caenorhabditis elegans (0 genes)
Saccharomyces cerevisiae strain S288C (1 genes)
Schizosaccharomyces pombe (1 genes)
Arabidopsis thaliana (3 genes)
Cyanidioschyzon merolae (2 genes)
Chondrus crispus (1 genes)
Galdieria sulphuraria (2 genes)
Emiliania huxleyi (3 genes)
Paramecium tetraurelia (0 genes)
Seminavis robusta (2 genes)
Synedra acus (4 genes)
Physcomitrella patens (2 genes)
Chlamydomonas reinhardtii (2 genes)
Pseudo-nitzschia multistriata (2 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
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Positions and Genes
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