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Interactive Phylogenetics Module
BLAST
Workbench
Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
CC00G206140
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
CC00G206140
Cyclotella cryptica
0.0e+00
1290.4
707
100.0
tps118780
Thalassiosira pseudonana
8.8e-206
718.4
556
64.2
tho160960
Thalassiosira oceanica
3.7e-188
659.8
561
60.2
Ec-25_002910
Ectocarpus siliculosus
7.2e-83
310.1
574
38.7
Sro1097_g240870
Seminavis robusta
1.5e-80
302.4
549
39.3
ps00G139000
Pseudo-nitzschia multiseries
4.8e-79
297.4
546
37.9
PSNMU-V1.4_AUG-EV-PASAV3_0102160
Pseudo-nitzschia multistriata
3.1e-78
294.7
547
38.0
sya00G140060
Synedra acus
2.1e-74
282.0
543
37.0
ptri177690
Phaeodactylum tricornutum
4.4e-72
274.2
550
37.3
fso117530
Fistulifera solaris
8.0e-66
253.4
501
35.5
fso162730
Fistulifera solaris
1.3e-60
236.1
484
34.3
emh530180
Emiliania huxleyi
2.3e-60
235.3
557
34.3
gene20270
Fragilariopsis cylindrus
3.3e-59
231.5
526
33.5
AT1G31910
Arabidopsis thaliana
1.9e-54
215.7
535
31.8
Pp3c6_2460
Physcomitrella patens
4.6e-53
211.1
514
33.1
gsu122010
Galdieria sulphuraria
6.0e-37
157.5
508
29.7
SPAC343.01c
Schizosaccharomyces pombe
1.9e-35
152.5
505
28.5
YMR220W
Saccharomyces cerevisiae strain S288C
3.5e-29
131.7
504
27.0
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (1 genes)
Thalassiosira pseudonana (1 genes)
Thalassiosira oceanica (1 genes)
Pseudo-nitzschia multiseries (1 genes)
Fistulifera solaris (2 genes)
Fragilariopsis cylindrus (1 genes)
Cyclotella cryptica (1 genes)
Aureococcus anophagefferens (0 genes)
Ectocarpus siliculosus (1 genes)
Nannochloropsis gaditana (0 genes)
Homo sapiens (0 genes)
Drosophila melanogaster (0 genes)
Caenorhabditis elegans (0 genes)
Saccharomyces cerevisiae strain S288C (1 genes)
Schizosaccharomyces pombe (1 genes)
Arabidopsis thaliana (1 genes)
Cyanidioschyzon merolae (0 genes)
Chondrus crispus (0 genes)
Galdieria sulphuraria (1 genes)
Emiliania huxleyi (1 genes)
Paramecium tetraurelia (0 genes)
Seminavis robusta (1 genes)
Synedra acus (1 genes)
Physcomitrella patens (1 genes)
Chlamydomonas reinhardtii (0 genes)
Pseudo-nitzschia multistriata (1 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
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Positions and Genes
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