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Interactive Phylogenetics Module
BLAST
Workbench
Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
CC00G204380
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
CC00G204380
Cyclotella cryptica
0.0e+00
2177.9
1190
100.0
tps230140
Thalassiosira pseudonana
0.0e+00
1159.8
757
77.0
Sro49_g028720
Seminavis robusta
1.7e-257
891.0
1211
47.6
sya00G263590
Synedra acus
1.1e-248
861.7
811
57.5
PSNMU-V1.4_AUG-EV-PASAV3_0055930
Pseudo-nitzschia multistriata
8.6e-246
852.0
1201
47.7
ps00G116560
Pseudo-nitzschia multiseries
2.2e-241
837.4
839
54.4
ptri241570
Phaeodactylum tricornutum
6.4e-225
782.7
821
50.9
gene15488
Fragilariopsis cylindrus
3.5e-223
776.9
646
60.8
fso83820
Fistulifera solaris
4.0e-211
736.9
757
53.1
fso88210
Fistulifera solaris
4.9e-209
729.9
757
52.7
tho229920
Thalassiosira oceanica
2.7e-207
724.2
790
49.6
AA0021G01210
Aureococcus anophagefferens
8.5e-169
596.3
762
45.3
Pp3c1_21120
Physcomitrella patens
6.3e-148
526.9
847
41.2
AT5G67100
Arabidopsis thaliana
3.0e-142
508.1
807
40.3
ENSG00000101868
Homo sapiens
1.2e-141
506.1
761
40.1
emh272570
Emiliania huxleyi
4.5e-138
494.2
764
39.9
FBgn0259113
Drosophila melanogaster
6.4e-124
447.2
797
36.8
Cre04.g214350
Chlamydomonas reinhardtii
3.2e-123
444.9
828
37.3
YNL102W
Saccharomyces cerevisiae strain S288C
7.8e-122
440.3
774
37.6
SPAC3H5.06c
Schizosaccharomyces pombe
4.7e-119
431.0
1163
29.9
ccr140240
Chondrus crispus
1.1e-118
429.9
906
34.7
WBGene00012936
Caenorhabditis elegans
1.1e-118
429.9
811
36.1
tho331580
Thalassiosira oceanica
5.8e-117
424.1
293
74.4
gsu98870
Galdieria sulphuraria
7.1e-107
390.6
792
33.8
CM09G01760
Cyanidioschyzon merolae
2.1e-95
352.4
881
31.6
pte511280
Paramecium tetraurelia
1.6e-82
309.7
800
29.9
Ec-12_006630
Ectocarpus siliculosus
5.1e-81
304.7
465
42.4
tho147700
Thalassiosira oceanica
3.2e-67
258.8
615
40.8
AA0005G01720
Aureococcus anophagefferens
7.0e-38
161.4
474
29.7
Cre01.g015250
Chlamydomonas reinhardtii
5.0e-36
155.2
467
28.1
ccr136780
Chondrus crispus
6.5e-36
154.8
458
27.5
CM14G01990
Cyanidioschyzon merolae
8.5e-36
154.5
443
27.8
Pp3c27_3350
Physcomitrella patens
1.1e-35
154.1
467
27.6
tho405360
Thalassiosira oceanica
1.9e-35
153.3
192
43.2
Pp3c6_19160
Physcomitrella patens
5.5e-35
151.8
469
27.5
WBGene00008645
Caenorhabditis elegans
7.2e-35
151.4
463
29.4
YDL102W
Saccharomyces cerevisiae strain S288C
7.2e-35
151.4
448
27.0
fso144230
Fistulifera solaris
1.6e-34
150.2
470
27.2
AT5G63960
Arabidopsis thaliana
2.1e-34
149.8
447
27.7
SPBC336.04
Schizosaccharomyces pombe
3.6e-34
149.1
470
27.2
FBgn0263600
Drosophila melanogaster
1.0e-33
147.5
471
28.7
gsu82940
Galdieria sulphuraria
1.4e-33
147.1
460
26.3
pte563840
Paramecium tetraurelia
1.8e-33
146.7
486
27.6
PSNMU-V1.4_AUG-EV-PASAV3_0048050
Pseudo-nitzschia multistriata
8.8e-33
144.4
478
27.2
ptri98820
Phaeodactylum tricornutum
2.6e-32
142.9
473
27.9
Ec-10_001440
Ectocarpus siliculosus
4.4e-32
142.1
455
26.4
gene6212
Fragilariopsis cylindrus
7.5e-32
141.4
478
25.9
sya00G178640
Synedra acus
9.8e-32
141.0
478
26.8
Sro278_g106640
Seminavis robusta
1.7e-31
140.2
471
27.4
Naga_100229g7
Nannochloropsis gaditana
8.3e-31
137.9
468
27.4
ps00G51020
Pseudo-nitzschia multiseries
4.1e-30
135.6
460
25.9
tps169130
Thalassiosira pseudonana
7.0e-30
134.8
455
26.4
CC00G177910
Cyclotella cryptica
2.0e-29
133.3
452
26.3
ENSG00000062822
Homo sapiens
1.5e-27
127.1
487
26.9
Ec-06_005880
Ectocarpus siliculosus
1.0e-25
120.9
391
26.3
fso59390
Fistulifera solaris
2.3e-25
119.8
489
26.0
tps230120
Thalassiosira pseudonana
2.3e-25
119.8
187
43.9
Pp3c17_18800
Physcomitrella patens
8.3e-23
111.3
453
26.9
AT1G67500
Arabidopsis thaliana
3.1e-22
109.4
500
23.8
tho135840
Thalassiosira oceanica
7.0e-22
108.2
310
29.0
FBgn0002891
Drosophila melanogaster
1.7e-20
103.6
508
23.8
ccr21960
Chondrus crispus
5.0e-20
102.1
512
23.2
Pp3c25_2990
Physcomitrella patens
1.1e-19
100.9
468
26.1
Pp3c16_6050
Physcomitrella patens
9.5e-19
97.8
229
33.2
gsu08620
Galdieria sulphuraria
6.1e-18
95.1
478
26.6
ENSG00000009413
Homo sapiens
1.8e-17
93.6
482
23.0
gene17542
Fragilariopsis cylindrus
3.0e-17
92.8
219
29.7
Pp3c10_25280
Physcomitrella patens
2.0e-16
90.1
227
30.4
Naga_100025g11
Nannochloropsis gaditana
4.4e-16
89.0
421
24.7
gene530
Fragilariopsis cylindrus
5.8e-16
88.6
537
23.1
Pp3c13_14690
Physcomitrella patens
3.7e-15
85.9
223
31.8
SPAC688.10
Schizosaccharomyces pombe
3.7e-15
85.9
373
25.2
WBGene00021344
Caenorhabditis elegans
6.4e-15
85.1
351
24.8
Pp3c2_33440
Physcomitrella patens
8.3e-15
84.7
347
26.8
tps28070
Thalassiosira pseudonana
5.4e-14
82.0
247
27.5
Pp3c10_11570
Physcomitrella patens
1.2e-13
80.9
227
31.7
Pp3c11_13900
Physcomitrella patens
2.7e-13
79.7
225
29.3
pte232000
Paramecium tetraurelia
4.6e-13
79.0
253
27.7
sya00G217340
Synedra acus
6.0e-13
78.6
285
26.0
pte412380
Paramecium tetraurelia
1.3e-12
77.4
342
23.1
Pp3c2_390
Physcomitrella patens
3.0e-12
76.3
226
30.1
fso173980
Fistulifera solaris
3.9e-12
75.9
274
26.3
Pp3c13_14630
Physcomitrella patens
3.9e-12
75.9
224
29.0
ps00G16990
Pseudo-nitzschia multiseries
3.9e-12
75.9
306
26.1
ptri13370
Phaeodactylum tricornutum
5.0e-12
75.5
277
26.4
fso141100
Fistulifera solaris
8.6e-12
74.7
274
25.9
CC00G194270
Cyclotella cryptica
1.1e-11
74.3
277
26.0
CM18G01020
Cyanidioschyzon merolae
1.5e-11
73.9
276
26.1
Sro443_g144000
Seminavis robusta
1.9e-11
73.6
283
25.4
tho175940
Thalassiosira oceanica
2.5e-11
73.2
227
26.9
Pp3c2_29370
Physcomitrella patens
3.3e-11
72.8
226
29.6
Pp3c1_290
Physcomitrella patens
3.3e-11
72.8
219
30.1
Cre03.g198750
Chlamydomonas reinhardtii
4.3e-11
72.4
273
26.7
Pp3c6_15720
Physcomitrella patens
7.3e-11
71.6
229
29.3
YPL167C
Saccharomyces cerevisiae strain S288C
4.7e-10
68.9
244
25.0
gsu92350
Galdieria sulphuraria
1.4e-09
67.4
266
24.1
Cre09.g387400
Chlamydomonas reinhardtii
8.9e-09
64.7
278
23.4
emh185860
Emiliania huxleyi
2.0e-08
63.5
158
29.1
emh350960
Emiliania huxleyi
4.4e-08
62.4
158
29.1
emh151600
Emiliania huxleyi
2.4e-06
56.6
161
28.0
emh323040
Emiliania huxleyi
5.4e-06
55.5
161
28.0
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (3 genes)
Thalassiosira pseudonana (4 genes)
Thalassiosira oceanica (6 genes)
Pseudo-nitzschia multiseries (3 genes)
Fistulifera solaris (6 genes)
Fragilariopsis cylindrus (4 genes)
Cyclotella cryptica (3 genes)
Aureococcus anophagefferens (2 genes)
Ectocarpus siliculosus (3 genes)
Nannochloropsis gaditana (2 genes)
Homo sapiens (3 genes)
Drosophila melanogaster (3 genes)
Caenorhabditis elegans (3 genes)
Saccharomyces cerevisiae strain S288C (3 genes)
Schizosaccharomyces pombe (3 genes)
Arabidopsis thaliana (3 genes)
Cyanidioschyzon merolae (3 genes)
Chondrus crispus (3 genes)
Galdieria sulphuraria (4 genes)
Emiliania huxleyi (5 genes)
Paramecium tetraurelia (4 genes)
Seminavis robusta (3 genes)
Synedra acus (3 genes)
Physcomitrella patens (16 genes)
Chlamydomonas reinhardtii (4 genes)
Pseudo-nitzschia multistriata (2 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
Positions only
Genes only
Positions and Genes
No editing