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Interactive Phylogenetics Module
BLAST
Workbench
Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
CC00G203880
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
CC00G203880
Cyclotella cryptica
2.9e-272
938.7
497
100.0
tps06870
Thalassiosira pseudonana
4.2e-194
679.1
466
72.3
ptri97570
Phaeodactylum tricornutum
3.5e-177
622.9
501
66.7
sya00G204370
Synedra acus
3.0e-176
619.8
493
64.1
Sro1157_g247410
Seminavis robusta
6.7e-176
618.6
500
63.0
PSNMU-V1.4_AUG-EV-PASAV3_0066490
Pseudo-nitzschia multistriata
6.3e-166
585.5
483
64.0
gene17619
Fragilariopsis cylindrus
9.0e-165
581.6
485
66.6
fso48210
Fistulifera solaris
3.6e-161
569.7
494
59.5
fso82140
Fistulifera solaris
1.4e-160
567.8
493
59.8
ps00G139700
Pseudo-nitzschia multiseries
1.5e-159
564.3
484
59.5
tho56440
Thalassiosira oceanica
9.5e-122
438.7
510
49.4
Ec-20_000670
Ectocarpus siliculosus
3.1e-112
407.1
493
46.5
Naga_100001g207
Nannochloropsis gaditana
8.6e-107
389.0
484
43.0
AT4G01320
Arabidopsis thaliana
3.9e-99
363.6
465
43.7
Pp3c4_3300
Physcomitrella patens
5.1e-99
363.2
469
43.7
Pp3c12_25070
Physcomitrella patens
7.3e-98
359.4
467
42.8
ENSG00000084073
Homo sapiens
6.6e-91
336.3
500
40.8
Cre07.g356150
Chlamydomonas reinhardtii
4.9e-86
320.1
472
41.1
FBgn0034176
Drosophila melanogaster
5.6e-82
306.6
403
40.0
gsu73690
Galdieria sulphuraria
2.1e-81
304.7
385
42.9
WBGene00001405
Caenorhabditis elegans
2.1e-76
288.1
413
39.0
YJR117W
Saccharomyces cerevisiae strain S288C
5.1e-75
283.5
418
40.2
SPAC3H1.05
Schizosaccharomyces pombe
9.0e-72
272.7
384
39.8
AA0081G00060
Aureococcus anophagefferens
2.0e-71
271.6
258
51.6
ccr192680
Chondrus crispus
9.3e-61
236.1
382
35.9
pte393790
Paramecium tetraurelia
1.4e-53
212.2
381
33.6
pte349780
Paramecium tetraurelia
9.3e-53
209.5
381
33.3
emh671200
Emiliania huxleyi
1.0e-46
189.5
382
31.4
FBgn0050462
Drosophila melanogaster
7.9e-36
153.3
399
26.3
FBgn0034175
Drosophila melanogaster
1.8e-32
142.1
405
26.2
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (1 genes)
Thalassiosira pseudonana (1 genes)
Thalassiosira oceanica (1 genes)
Pseudo-nitzschia multiseries (1 genes)
Fistulifera solaris (2 genes)
Fragilariopsis cylindrus (1 genes)
Cyclotella cryptica (1 genes)
Aureococcus anophagefferens (1 genes)
Ectocarpus siliculosus (1 genes)
Nannochloropsis gaditana (1 genes)
Homo sapiens (1 genes)
Drosophila melanogaster (3 genes)
Caenorhabditis elegans (1 genes)
Saccharomyces cerevisiae strain S288C (1 genes)
Schizosaccharomyces pombe (1 genes)
Arabidopsis thaliana (1 genes)
Cyanidioschyzon merolae (0 genes)
Chondrus crispus (1 genes)
Galdieria sulphuraria (1 genes)
Emiliania huxleyi (1 genes)
Paramecium tetraurelia (2 genes)
Seminavis robusta (1 genes)
Synedra acus (1 genes)
Physcomitrella patens (2 genes)
Chlamydomonas reinhardtii (1 genes)
Pseudo-nitzschia multistriata (1 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
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Positions and Genes
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