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Interactive Phylogenetics Module
BLAST
Workbench
Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
CC00G201970
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
CC00G201970
Cyclotella cryptica
4.3e-210
731.9
392
100.0
fso108990
Fistulifera solaris
7.2e-125
448.7
336
71.1
ptri127180
Phaeodactylum tricornutum
2.3e-123
443.7
323
71.5
fso86310
Fistulifera solaris
4.0e-123
443.0
315
74.3
Sro2062_g313040
Seminavis robusta
4.4e-122
439.5
291
76.3
gene16872
Fragilariopsis cylindrus
3.7e-121
436.4
332
69.3
Sro281_g107280
Seminavis robusta
8.3e-121
435.3
291
75.6
ps00G172810
Pseudo-nitzschia multiseries
1.1e-120
434.9
300
74.0
tps120590
Thalassiosira pseudonana
1.0e-102
375.2
189
95.8
sya00G93400
Synedra acus
4.4e-74
280.0
264
59.5
sya00G106980
Synedra acus
6.6e-70
266.2
252
58.7
sya00G249320
Synedra acus
8.1e-68
259.2
290
53.4
Ec-16_000700
Ectocarpus siliculosus
3.0e-54
214.2
213
46.5
gene13040
Fragilariopsis cylindrus
1.4e-51
205.3
109
93.6
Naga_100008g49
Nannochloropsis gaditana
4.5e-50
200.3
208
45.2
Naga_100001g62
Nannochloropsis gaditana
2.3e-38
161.4
195
43.1
pte351730
Paramecium tetraurelia
1.6e-15
85.5
205
25.9
pte730230
Paramecium tetraurelia
3.6e-15
84.3
207
26.1
pte436320
Paramecium tetraurelia
1.0e-14
82.8
205
25.9
pte388430
Paramecium tetraurelia
3.0e-14
81.3
196
27.6
pte715390
Paramecium tetraurelia
4.0e-14
80.9
205
24.9
pte743780
Paramecium tetraurelia
6.7e-14
80.1
215
24.7
pte765510
Paramecium tetraurelia
8.8e-14
79.7
216
24.5
pte120290
Paramecium tetraurelia
1.1e-13
79.3
196
26.0
pte323990
Paramecium tetraurelia
1.5e-13
79.0
196
26.5
pte239960
Paramecium tetraurelia
2.0e-13
78.6
207
27.1
pte374670
Paramecium tetraurelia
2.0e-13
78.6
195
27.7
pte347660
Paramecium tetraurelia
2.6e-13
78.2
201
27.4
pte337740
Paramecium tetraurelia
7.4e-13
76.6
214
26.6
pte696730
Paramecium tetraurelia
7.4e-13
76.6
215
23.3
pte140750
Paramecium tetraurelia
2.8e-12
74.7
195
25.1
pte168430
Paramecium tetraurelia
1.8e-11
72.0
216
25.9
pte193370
Paramecium tetraurelia
2.4e-11
71.6
195
24.1
pte391610
Paramecium tetraurelia
2.4e-11
71.6
197
25.9
pte183540
Paramecium tetraurelia
4.1e-11
70.9
213
25.8
pte15350
Paramecium tetraurelia
7.0e-11
70.1
200
26.5
pte138840
Paramecium tetraurelia
7.7e-10
66.6
175
25.7
pte557330
Paramecium tetraurelia
1.0e-09
66.2
200
26.5
pte697130
Paramecium tetraurelia
1.7e-09
65.5
211
24.6
pte461900
Paramecium tetraurelia
2.2e-09
65.1
211
23.7
pte284630
Paramecium tetraurelia
6.5e-09
63.5
205
24.4
pte77300
Paramecium tetraurelia
1.1e-08
62.8
175
24.6
pte11790
Paramecium tetraurelia
3.2e-08
61.2
200
23.5
pte743420
Paramecium tetraurelia
3.2e-08
61.2
152
26.3
pte530050
Paramecium tetraurelia
4.2e-08
60.8
211
23.7
pte540320
Paramecium tetraurelia
7.2e-08
60.1
211
23.7
pte730690
Paramecium tetraurelia
7.2e-08
60.1
154
29.2
pte661160
Paramecium tetraurelia
9.4e-08
59.7
203
24.1
pte765930
Paramecium tetraurelia
9.4e-08
59.7
152
25.0
pte654870
Paramecium tetraurelia
1.6e-07
58.9
223
23.3
pte87320
Paramecium tetraurelia
3.6e-07
57.8
197
21.8
pte751340
Paramecium tetraurelia
1.8e-06
55.5
203
23.2
AA0001G05650
Aureococcus anophagefferens
2.3e-06
55.1
61
37.7
pte243080
Paramecium tetraurelia
2.3e-06
55.1
203
24.1
Cre12.g517850
Chlamydomonas reinhardtii
5.2e-06
53.9
61
34.4
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (1 genes)
Thalassiosira pseudonana (1 genes)
Thalassiosira oceanica (0 genes)
Pseudo-nitzschia multiseries (1 genes)
Fistulifera solaris (2 genes)
Fragilariopsis cylindrus (2 genes)
Cyclotella cryptica (1 genes)
Aureococcus anophagefferens (1 genes)
Ectocarpus siliculosus (1 genes)
Nannochloropsis gaditana (2 genes)
Homo sapiens (0 genes)
Drosophila melanogaster (0 genes)
Caenorhabditis elegans (0 genes)
Saccharomyces cerevisiae strain S288C (0 genes)
Schizosaccharomyces pombe (0 genes)
Arabidopsis thaliana (0 genes)
Cyanidioschyzon merolae (0 genes)
Chondrus crispus (0 genes)
Galdieria sulphuraria (0 genes)
Emiliania huxleyi (0 genes)
Paramecium tetraurelia (37 genes)
Seminavis robusta (2 genes)
Synedra acus (3 genes)
Physcomitrella patens (0 genes)
Chlamydomonas reinhardtii (1 genes)
Pseudo-nitzschia multistriata (0 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
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Positions and Genes
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