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Interactive Phylogenetics Module
BLAST
Workbench
Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
CC00G201960
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
CC00G188240
Cyclotella cryptica
2.1e-64
246.1
118
100.0
CC00G201960
Cyclotella cryptica
2.1e-64
246.1
118
100.0
CC00G21740
Cyclotella cryptica
5.5e-52
204.9
107
86.9
CC00G91710
Cyclotella cryptica
3.5e-51
202.2
111
82.0
CC00G68540
Cyclotella cryptica
7.9e-51
201.1
107
86.0
CC00G116170
Cyclotella cryptica
8.7e-50
197.6
107
83.2
CC00G211010
Cyclotella cryptica
8.7e-50
197.6
111
78.4
CC00G68480
Cyclotella cryptica
2.5e-49
196.1
107
83.2
CC00G21770
Cyclotella cryptica
7.4e-49
194.5
111
77.5
CC00G123070
Cyclotella cryptica
9.6e-49
194.1
111
77.5
CC00G39560
Cyclotella cryptica
1.3e-48
193.7
107
80.4
CC00G189330
Cyclotella cryptica
1.3e-48
193.7
107
80.4
CC00G65410
Cyclotella cryptica
1.6e-48
193.4
107
82.2
CC00G134420
Cyclotella cryptica
1.6e-48
193.4
107
81.3
CC00G81820
Cyclotella cryptica
4.8e-48
191.8
116
77.6
CC00G81800
Cyclotella cryptica
1.8e-47
189.9
106
80.2
CC00G04150
Cyclotella cryptica
2.4e-47
189.5
107
77.6
CC00G37910
Cyclotella cryptica
2.4e-47
189.5
107
77.6
CC00G208340
Cyclotella cryptica
3.1e-47
189.1
107
78.5
CC00G128250
Cyclotella cryptica
5.3e-47
188.3
106
78.3
CC00G25510
Cyclotella cryptica
6.9e-47
188.0
107
77.6
CC00G206910
Cyclotella cryptica
4.2e-44
178.7
107
72.0
CC00G135300
Cyclotella cryptica
3.9e-42
172.2
107
72.9
CC00G45310
Cyclotella cryptica
1.9e-41
169.9
96
78.1
CC00G108870
Cyclotella cryptica
7.7e-30
131.3
73
84.9
CC00G189880
Cyclotella cryptica
1.0e-29
131.0
70
78.6
CC00G188220
Cyclotella cryptica
6.5e-29
128.3
64
89.1
CC00G56590
Cyclotella cryptica
4.2e-20
99.0
47
89.4
CC00G02000
Cyclotella cryptica
8.0e-19
94.7
111
46.8
CC00G179730
Cyclotella cryptica
5.2e-18
92.0
49
81.6
CC00G188230
Cyclotella cryptica
1.4e-07
57.4
28
96.4
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (0 genes)
Thalassiosira pseudonana (0 genes)
Thalassiosira oceanica (0 genes)
Pseudo-nitzschia multiseries (0 genes)
Fistulifera solaris (0 genes)
Fragilariopsis cylindrus (0 genes)
Cyclotella cryptica (31 genes)
Aureococcus anophagefferens (0 genes)
Ectocarpus siliculosus (0 genes)
Nannochloropsis gaditana (0 genes)
Homo sapiens (0 genes)
Drosophila melanogaster (0 genes)
Caenorhabditis elegans (0 genes)
Saccharomyces cerevisiae strain S288C (0 genes)
Schizosaccharomyces pombe (0 genes)
Arabidopsis thaliana (0 genes)
Cyanidioschyzon merolae (0 genes)
Chondrus crispus (0 genes)
Galdieria sulphuraria (0 genes)
Emiliania huxleyi (0 genes)
Paramecium tetraurelia (0 genes)
Seminavis robusta (0 genes)
Synedra acus (0 genes)
Physcomitrella patens (0 genes)
Chlamydomonas reinhardtii (0 genes)
Pseudo-nitzschia multistriata (0 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
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Positions and Genes
No editing