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Interactive Phylogenetics Module
BLAST
Workbench
Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
CC00G192210
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
CC00G192210
Cyclotella cryptica
0.0e+00
1789.2
1168
100.0
tps06310
Thalassiosira pseudonana
1.7e-307
1057.0
906
66.1
tho264820
Thalassiosira oceanica
3.0e-203
710.7
838
51.1
sya00G104340
Synedra acus
5.2e-203
709.9
846
49.8
fso90670
Fistulifera solaris
1.1e-197
692.2
737
53.9
ptri189680
Phaeodactylum tricornutum
2.3e-195
684.5
877
47.1
fso146520
Fistulifera solaris
3.0e-195
684.1
735
53.6
PSNMU-V1.4_AUG-EV-PASAV3_0003950
Pseudo-nitzschia multistriata
1.4e-184
648.7
800
52.1
ps00G38170
Pseudo-nitzschia multiseries
2.7e-183
644.4
807
50.9
gene9114
Fragilariopsis cylindrus
2.9e-177
624.4
528
60.8
gene44
Fragilariopsis cylindrus
1.1e-176
622.5
528
60.6
Sro827_g207800
Seminavis robusta
1.7e-166
588.6
803
46.7
Ec-04_004310
Ectocarpus siliculosus
1.8e-102
375.9
745
38.3
AA0002G01460
Aureococcus anophagefferens
2.2e-92
342.4
520
38.7
ENSG00000035928
Homo sapiens
1.8e-75
286.2
820
30.7
SPBC23E6.07c
Schizosaccharomyces pombe
1.7e-73
279.6
519
34.5
WBGene00004337
Caenorhabditis elegans
1.1e-67
260.4
552
33.7
gsu106230
Galdieria sulphuraria
7.0e-67
257.7
543
34.1
YOR217W
Saccharomyces cerevisiae strain S288C
7.8e-66
254.2
525
32.4
gene43
Fragilariopsis cylindrus
1.0e-65
253.8
232
53.4
Cre12.g521200
Chlamydomonas reinhardtii
1.3e-65
253.4
556
33.1
emh328310
Emiliania huxleyi
1.0e-62
243.8
544
32.2
AT5G22010
Arabidopsis thaliana
1.4e-62
243.4
550
34.4
ccr96820
Chondrus crispus
3.1e-62
242.3
567
32.1
FBgn0004913
Drosophila melanogaster
5.2e-62
241.5
562
35.2
Pp3c22_21030
Physcomitrella patens
1.5e-56
223.4
524
32.3
CM18G00280
Cyanidioschyzon merolae
3.6e-55
218.8
598
31.3
pte687580
Paramecium tetraurelia
1.4e-46
190.3
728
26.2
pte254120
Paramecium tetraurelia
4.1e-43
178.7
522
29.3
pte616020
Paramecium tetraurelia
7.8e-42
174.5
544
27.8
pte690410
Paramecium tetraurelia
2.3e-41
172.9
522
28.4
YMR078C
Saccharomyces cerevisiae strain S288C
4.2e-19
99.0
299
26.8
WBGene00010676
Caenorhabditis elegans
9.3e-19
97.8
318
27.4
SPBC902.02c
Schizosaccharomyces pombe
2.3e-17
93.2
306
26.1
FBgn0015376
Drosophila melanogaster
6.7e-17
91.7
298
26.2
AT1G04730
Arabidopsis thaliana
1.1e-16
90.9
409
24.4
ENSG00000127586
Homo sapiens
9.6e-16
87.8
293
25.3
sya00G110730
Synedra acus
1.6e-15
87.0
270
25.9
ptri150740
Phaeodactylum tricornutum
6.2e-15
85.1
350
25.7
tho264840
Thalassiosira oceanica
8.2e-15
84.7
60
65.0
pte66270
Paramecium tetraurelia
1.8e-14
83.6
237
26.2
Naga_100156g15
Nannochloropsis gaditana
4.0e-14
82.4
214
29.4
AT1G77620
Arabidopsis thaliana
1.2e-13
80.9
301
24.9
tps156960
Thalassiosira pseudonana
2.0e-13
80.1
304
24.7
CC00G48690
Cyclotella cryptica
4.5e-13
79.0
300
24.3
Pp3c12_8350
Physcomitrella patens
5.8e-13
78.6
321
24.0
pte259470
Paramecium tetraurelia
1.0e-12
77.8
234
28.2
gene2388
Fragilariopsis cylindrus
2.9e-12
76.3
250
26.0
ps00G182550
Pseudo-nitzschia multiseries
2.9e-12
76.3
343
23.3
fso141240
Fistulifera solaris
4.9e-12
75.5
291
26.1
WBGene00004338
Caenorhabditis elegans
8.4e-12
74.7
233
27.9
AT1G63160
Arabidopsis thaliana
1.1e-11
74.3
234
27.8
emh490460
Emiliania huxleyi
1.4e-11
73.9
243
25.5
emh456660
Emiliania huxleyi
1.4e-11
73.9
243
25.5
fso173840
Fistulifera solaris
1.4e-11
73.9
287
27.5
CM06G01100
Cyanidioschyzon merolae
1.9e-11
73.6
232
26.7
Pp3c7_23730
Physcomitrella patens
1.9e-11
73.6
407
23.6
YNL290W
Saccharomyces cerevisiae strain S288C
1.9e-11
73.6
234
26.9
YOL094C
Saccharomyces cerevisiae strain S288C
2.5e-11
73.2
231
28.1
AA0020G00120
Aureococcus anophagefferens
5.5e-11
72.0
276
26.1
Cre07.g337150
Chlamydomonas reinhardtii
7.1e-11
71.6
232
27.6
Sro730_g194110
Seminavis robusta
9.3e-11
71.2
236
25.4
fso168430
Fistulifera solaris
1.6e-10
70.5
245
24.5
Pp3c16_21800
Physcomitrella patens
1.6e-10
70.5
231
26.8
fso151940
Fistulifera solaris
2.7e-10
69.7
245
24.5
PSNMU-V1.4_AUG-EV-PASAV3_0062320
Pseudo-nitzschia multistriata
2.7e-10
69.7
264
25.4
Ec-02_004800
Ectocarpus siliculosus
3.5e-10
69.3
240
23.8
PSNMU-V1.4_AUG-EV-PASAV3_0119840
Pseudo-nitzschia multistriata
3.5e-10
69.3
235
27.2
FBgn0260985
Drosophila melanogaster
4.6e-10
68.9
232
26.3
ccr38980
Chondrus crispus
7.9e-10
68.2
241
23.7
Pp3c13_4510
Physcomitrella patens
1.3e-09
67.4
231
24.7
SPAC1687.03c
Schizosaccharomyces pombe
1.3e-09
67.4
233
24.9
ptri32500
Phaeodactylum tricornutum
1.8e-09
67.0
231
25.1
Cre16.g686950
Chlamydomonas reinhardtii
2.3e-09
66.6
315
21.3
AA0004G04040
Aureococcus anophagefferens
3.0e-09
66.2
231
26.4
gene13290
Fragilariopsis cylindrus
3.0e-09
66.2
235
24.3
SPBC947.11c
Schizosaccharomyces pombe
6.7e-09
65.1
279
25.1
CC00G97960
Cyclotella cryptica
1.1e-08
64.3
234
25.6
FBgn0030871
Drosophila melanogaster
1.5e-08
63.9
238
24.4
ENSG00000049541
Homo sapiens
2.5e-08
63.2
276
24.3
ps00G185310
Pseudo-nitzschia multiseries
2.5e-08
63.2
243
24.3
PSNMU-V1.4_AUG-EV-PASAV3_0005500
Pseudo-nitzschia multistriata
3.3e-08
62.8
236
24.6
AA0011G02360
Aureococcus anophagefferens
5.7e-08
62.0
189
28.0
Cre12.g527300
Chlamydomonas reinhardtii
9.7e-08
61.2
244
23.0
CC00G48970
Cyclotella cryptica
1.3e-07
60.8
244
24.6
ENSG00000176208
Homo sapiens
2.2e-07
60.1
139
27.3
tps213810
Thalassiosira pseudonana
2.8e-07
59.7
232
24.6
AT1G77470
Arabidopsis thaliana
6.3e-07
58.5
231
22.1
tho295520
Thalassiosira oceanica
1.8e-06
57.0
231
25.1
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (3 genes)
Thalassiosira pseudonana (3 genes)
Thalassiosira oceanica (3 genes)
Pseudo-nitzschia multiseries (3 genes)
Fistulifera solaris (6 genes)
Fragilariopsis cylindrus (5 genes)
Cyclotella cryptica (4 genes)
Aureococcus anophagefferens (4 genes)
Ectocarpus siliculosus (2 genes)
Nannochloropsis gaditana (1 genes)
Homo sapiens (4 genes)
Drosophila melanogaster (4 genes)
Caenorhabditis elegans (3 genes)
Saccharomyces cerevisiae strain S288C (4 genes)
Schizosaccharomyces pombe (4 genes)
Arabidopsis thaliana (5 genes)
Cyanidioschyzon merolae (2 genes)
Chondrus crispus (2 genes)
Galdieria sulphuraria (1 genes)
Emiliania huxleyi (3 genes)
Paramecium tetraurelia (6 genes)
Seminavis robusta (2 genes)
Synedra acus (2 genes)
Physcomitrella patens (5 genes)
Chlamydomonas reinhardtii (4 genes)
Pseudo-nitzschia multistriata (4 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
Positions only
Genes only
Positions and Genes
No editing