Toggle navigation
Data
Overview
Download
Analyze
Gene families
Expansion_plot
Gene family finder
Synteny plot
Colinearity
Ks-graphs
Skyline plot
WGDotplot
Colinear region finder
Localization
Functional clusters
WGMapping
Other
Interactive Phylogenetics Module
BLAST
Workbench
Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
CC00G192140
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
CC00G192140
Cyclotella cryptica
3.6e-169
595.5
298
100.0
tho322260
Thalassiosira oceanica
3.0e-91
336.7
248
70.6
tps55980
Thalassiosira pseudonana
2.2e-65
250.8
125
96.0
ptri211210
Phaeodactylum tricornutum
1.7e-57
224.6
243
53.1
fso117830
Fistulifera solaris
1.9e-56
221.1
225
54.7
fso16150
Fistulifera solaris
2.4e-56
220.7
222
56.3
PSNMU-V1.4_AUG-EV-PASAV3_0039110
Pseudo-nitzschia multistriata
2.7e-55
217.2
149
69.8
Sro91_g047660
Seminavis robusta
2.5e-53
210.7
150
68.0
ps00G92440
Pseudo-nitzschia multiseries
1.8e-51
204.5
140
70.7
gene20520
Fragilariopsis cylindrus
3.1e-51
203.8
139
73.4
sya00G45690
Synedra acus
3.1e-43
177.2
150
59.3
AA0081G00080
Aureococcus anophagefferens
3.2e-40
167.2
139
57.6
AT3G49080
Arabidopsis thaliana
7.3e-37
156.0
164
48.2
ccr100340
Chondrus crispus
1.6e-36
154.8
139
55.4
Pp3c4_6350
Physcomitrella patens
6.2e-36
152.9
169
49.1
Naga_100036g8
Nannochloropsis gaditana
9.9e-34
145.6
142
51.4
ps00G41270
Pseudo-nitzschia multiseries
3.2e-32
140.6
143
49.7
Ec-13_004660
Ectocarpus siliculosus
6.0e-31
136.3
152
48.7
sya00G215200
Synedra acus
1.0e-30
135.6
141
50.4
gsu88150
Galdieria sulphuraria
1.0e-25
119.0
132
44.7
YBR146W
Saccharomyces cerevisiae strain S288C
5.5e-24
113.2
137
42.3
emh743100
Emiliania huxleyi
3.0e-22
107.5
137
45.3
psmC00320
Pseudo-nitzschia multiseries
3.9e-22
107.1
125
48.8
CM17G01750
Cyanidioschyzon merolae
2.5e-21
104.4
102
52.0
AT1G74970
Arabidopsis thaliana
2.8e-20
100.9
125
45.6
emh151120
Emiliania huxleyi
2.8e-20
100.9
131
45.0
syaC01140
Synedra acus
8.2e-20
99.4
125
46.4
ccr_chlor00G00760
Chondrus crispus
4.0e-19
97.1
125
44.8
ENSG00000135972
Homo sapiens
5.3e-19
96.7
137
43.8
ptri_chlor02350
Phaeodactylum tricornutum
1.2e-18
95.5
125
44.0
FBgn0037529
Drosophila melanogaster
2.0e-18
94.7
137
46.0
thoC03060
Thalassiosira oceanica
2.6e-18
94.4
125
43.2
fsoC00620
Fistulifera solaris
4.5e-18
93.6
134
40.3
Pp3c12_1790
Physcomitrella patens
4.5e-18
93.6
164
39.0
SPAC29A4.03c
Schizosaccharomyces pombe
5.8e-18
93.2
132
38.6
tpsC02730
Thalassiosira pseudonana
1.3e-17
92.0
125
42.4
CYCR_CHL00G01210
Cyclotella cryptica
1.7e-17
91.7
125
44.0
ngaC00350
Nannochloropsis gaditana
8.4e-17
89.4
130
43.1
gsu_chlor00G00380
Galdieria sulphuraria
6.1e-15
83.2
131
39.7
esiC00570
Ectocarpus siliculosus
2.5e-13
77.8
132
40.9
Cre02.g106750
Chlamydomonas reinhardtii
4.3e-13
77.0
149
40.3
AACG00650
Aureococcus anophagefferens
6.3e-12
73.2
71
54.9
pte165930
Paramecium tetraurelia
1.2e-10
68.9
124
33.9
pte498440
Paramecium tetraurelia
1.2e-10
68.9
124
33.9
Pp3c9_4940
Physcomitrella patens
2.5e-08
61.2
138
34.1
CMCG01880
Cyanidioschyzon merolae
9.4e-08
59.3
129
36.4
WBGene00017319
Caenorhabditis elegans
6.1e-07
56.6
159
28.9
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (2 genes)
Thalassiosira pseudonana (2 genes)
Thalassiosira oceanica (2 genes)
Pseudo-nitzschia multiseries (3 genes)
Fistulifera solaris (3 genes)
Fragilariopsis cylindrus (1 genes)
Cyclotella cryptica (2 genes)
Aureococcus anophagefferens (2 genes)
Ectocarpus siliculosus (2 genes)
Nannochloropsis gaditana (2 genes)
Homo sapiens (1 genes)
Drosophila melanogaster (1 genes)
Caenorhabditis elegans (1 genes)
Saccharomyces cerevisiae strain S288C (1 genes)
Schizosaccharomyces pombe (1 genes)
Arabidopsis thaliana (2 genes)
Cyanidioschyzon merolae (2 genes)
Chondrus crispus (2 genes)
Galdieria sulphuraria (2 genes)
Emiliania huxleyi (2 genes)
Paramecium tetraurelia (2 genes)
Seminavis robusta (1 genes)
Synedra acus (3 genes)
Physcomitrella patens (3 genes)
Chlamydomonas reinhardtii (1 genes)
Pseudo-nitzschia multistriata (1 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
Positions only
Genes only
Positions and Genes
No editing