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Interactive Phylogenetics Module
BLAST
Workbench
Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
CC00G183010
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
CC00G183010
Cyclotella cryptica
0.0e+00
1331.6
679
100.0
tps91340
Thalassiosira pseudonana
2.9e-166
587.0
718
48.9
tho73780
Thalassiosira oceanica
7.7e-82
306.6
575
34.1
ptri103080
Phaeodactylum tricornutum
2.4e-59
231.9
632
29.7
fso60510
Fistulifera solaris
4.2e-56
221.1
611
30.0
fso106660
Fistulifera solaris
1.0e-49
199.9
611
28.8
sya00G138580
Synedra acus
1.2e-47
193.0
609
27.3
PSNMU-V1.4_AUG-EV-PASAV3_0030470
Pseudo-nitzschia multistriata
2.1e-47
192.2
615
30.7
gene18308
Fragilariopsis cylindrus
7.0e-43
177.2
637
27.3
ps00G22450
Pseudo-nitzschia multiseries
2.3e-33
145.6
485
29.1
Sro472_g149900
Seminavis robusta
2.3e-30
135.6
746
24.5
Ec-24_003690
Ectocarpus siliculosus
2.7e-26
122.1
586
23.5
ENSG00000079246
Homo sapiens
1.4e-06
56.6
475
20.8
Pp3c22_11100
Physcomitrella patens
6.9e-06
54.3
216
26.9
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (1 genes)
Thalassiosira pseudonana (1 genes)
Thalassiosira oceanica (1 genes)
Pseudo-nitzschia multiseries (1 genes)
Fistulifera solaris (2 genes)
Fragilariopsis cylindrus (1 genes)
Cyclotella cryptica (1 genes)
Aureococcus anophagefferens (0 genes)
Ectocarpus siliculosus (1 genes)
Nannochloropsis gaditana (0 genes)
Homo sapiens (1 genes)
Drosophila melanogaster (0 genes)
Caenorhabditis elegans (0 genes)
Saccharomyces cerevisiae strain S288C (0 genes)
Schizosaccharomyces pombe (0 genes)
Arabidopsis thaliana (0 genes)
Cyanidioschyzon merolae (0 genes)
Chondrus crispus (0 genes)
Galdieria sulphuraria (0 genes)
Emiliania huxleyi (0 genes)
Paramecium tetraurelia (0 genes)
Seminavis robusta (1 genes)
Synedra acus (1 genes)
Physcomitrella patens (1 genes)
Chlamydomonas reinhardtii (0 genes)
Pseudo-nitzschia multistriata (1 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
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Positions and Genes
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